Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110535658 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 37542062 ~ 37543202 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002475288.2 | False | 435 | mRNA | 0.45 | 3 | 37542062 | 37543190 |
| TU1109131 | True | 413 | TUCP | 0.45 | 3 | 37542096 | 37543202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535657 | LOC106578664 | coding | upstream | 3203 | 37522651 ~ 37538859 (+) |
| LOC110535656 | LOC106578665 | coding | upstream | 28727 | 37384483 ~ 37513335 (+) |
| LOC110535654 | LOC106578667 | coding | upstream | 181996 | 37335611 ~ 37360066 (+) |
| LOC110535653 | LOC106578669 | coding | upstream | 210260 | 37260642 ~ 37331802 (+) |
| LOC110535652 | LOC101448051 | coding | upstream | 315517 | 37225018 ~ 37226545 (+) |
| lztfl1 | LOC106590188 | coding | downstream | 269987 | 37813177 ~ 37835340 (+) |
| LOC118937439 | NA | coding | downstream | 293796 | 37836986 ~ 37843507 (+) |
| LOC110535665 | LOC106578656 | coding | downstream | 303957 | 37847147 ~ 37850426 (+) |
| LOC110535015 | LOC106578726 | coding | downstream | 323525 | 37866715 ~ 38045713 (+) |
| LOC110535669 | impa1 | coding | downstream | 655936 | 38199126 ~ 38217258 (+) |
| G973772 | NA | non-coding | upstream | 96362 | 37348459 ~ 37445700 (+) |
| G973814 | NA | non-coding | upstream | 126440 | 37414232 ~ 37415622 (+) |
| G973721 | NA | non-coding | upstream | 305037 | 37236794 ~ 37237025 (+) |
| G973716 | NA | non-coding | upstream | 310164 | 37231685 ~ 37231898 (+) |
| G973853 | NA | non-coding | downstream | 19915 | 37563105 ~ 37565972 (+) |
| G973995 | NA | non-coding | downstream | 209513 | 37752703 ~ 37776891 (+) |
| G974074 | NA | non-coding | downstream | 343770 | 37886960 ~ 37887426 (+) |
| G974090 | NA | non-coding | downstream | 364653 | 37907843 ~ 37908175 (+) |
| G974095 | NA | non-coding | downstream | 371769 | 37914959 ~ 38005906 (+) |
| G972725 | NA | other | upstream | 1291476 | 36249973 ~ 36250586 (+) |
| G970489 | LOC106578645 | other | upstream | 3019722 | 34516457 ~ 34522340 (+) |
| G970283 | NA | other | upstream | 3362014 | 34179703 ~ 34180048 (+) |
| G970054 | LOC106578636 | other | upstream | 3371075 | 34163816 ~ 34170987 (+) |
| G969752 | LOC106578632 | other | upstream | 3747001 | 33794375 ~ 33795061 (+) |
| G973918 | NA | other | downstream | 107948 | 37651138 ~ 37679368 (+) |
| G974184 | NA | other | downstream | 514608 | 38057798 ~ 38063100 (+) |
| G976017 | NA | other | downstream | 1514486 | 39057676 ~ 39058011 (+) |
