Item | Value |
---|---|
gene id | LOC110536483 |
gene name | isl1 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048575.1 |
NCBI id | CM023229.2 |
chromosome length | 86280908 |
location | 81920366 ~ 81928214 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
isl1 | Enables DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription factor binding activity; and cis-regulatory region sequence-specific DNA binding activity. Involved in cardiac cell fate determination; positive regulation of transcription by RNA polymerase II; and secondary heart field specification. Predicted to be part of chromatin. Predicted to be active in nucleus. Implicated in type 1 diabetes mellitus and type 2 diabetes mellitus. |
description |
---|
insulin gene enhancer protein ISL-1 isoform X4 |
id | name | namespace |
---|---|---|
GO:0021522 | spinal cord motor neuron differentiation | biological_process |
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0055011 | atrial cardiac muscle cell differentiation | biological_process |
GO:0055012 | ventricular cardiac muscle cell differentiation | biological_process |
GO:0031017 | exocrine pancreas development | biological_process |
GO:0008016 | regulation of heart contraction | biological_process |
GO:0048665 | neuron fate specification | biological_process |
GO:0048936 | peripheral nervous system neuron axonogenesis | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
GO:0008270 | zinc ion binding | molecular_function |
id | description |
---|---|
K09370 | ISL1; insulin gene enhancer protein ISL-1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021622253.2 | False | 2488 | mRNA | 0.50 | 6 | 81920366 | 81928214 |
XM_021622254.2 | False | 2485 | mRNA | 0.50 | 6 | 81920366 | 81928214 |
XM_021622255.2 | False | 2467 | mRNA | 0.50 | 6 | 81920366 | 81928214 |
XM_021622256.2 | True | 2464 | mRNA | 0.50 | 6 | 81920366 | 81928214 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118937459 | NA | coding | downstream | 109253 | 81810059 ~ 81811117 (-) |
LOC118937401 | NA | coding | downstream | 132826 | 81764643 ~ 81787540 (-) |
fsta | LOC100301657 | coding | downstream | 348767 | 81558951 ~ 81571599 (-) |
ndufs4 | ndufs4 | coding | downstream | 376791 | 81497787 ~ 81543575 (-) |
LOC118937400 | NA | coding | downstream | 553201 | 81364958 ~ 81367165 (-) |
LOC118937423 | NA | coding | upstream | 229440 | 82157654 ~ 82159243 (-) |
LOC110535140 | parp8 | coding | upstream | 232754 | 82160968 ~ 82245174 (-) |
LOC110536485 | NA | coding | upstream | 324314 | 82252528 ~ 82257457 (-) |
LOC110536484 | LOC106570928 | coding | upstream | 329616 | 82257489 ~ 82522382 (-) |
LOC110536491 | LOC106570936 | coding | upstream | 602022 | 82530236 ~ 82563337 (-) |
G1023719 | NA | non-coding | downstream | 144852 | 81775145 ~ 81775514 (-) |
G1023711 | NA | non-coding | downstream | 150865 | 81769246 ~ 81769501 (-) |
G1023695 | NA | non-coding | downstream | 186666 | 81733392 ~ 81733700 (-) |
G1023637 | NA | non-coding | downstream | 275308 | 81644744 ~ 81645058 (-) |
G1023903 | NA | non-coding | upstream | 28843 | 81957057 ~ 81968466 (-) |
G1023918 | NA | non-coding | upstream | 73394 | 82001608 ~ 82004948 (-) |
G1023933 | NA | non-coding | upstream | 130841 | 82059055 ~ 82059257 (-) |
G1023939 | NA | non-coding | upstream | 132655 | 82060869 ~ 82061110 (-) |
G1024244 | NA | non-coding | upstream | 141136 | 82069350 ~ 82072081 (-) |
G1023858 | NA | other | downstream | 5999 | 81912957 ~ 81914367 (-) |
G1023618 | NA | other | downstream | 303137 | 81615253 ~ 81617939 (-) |
G1023156 | NA | other | downstream | 779787 | 81139984 ~ 81140579 (-) |
G1023036 | NA | other | downstream | 1022363 | 80893902 ~ 80898003 (-) |
G1022604 | NA | other | downstream | 1379387 | 80540452 ~ 80540979 (-) |
G1025481 | NA | other | upstream | 1634088 | 83562302 ~ 83565574 (-) |
G1025467 | NA | other | upstream | 1693509 | 83544297 ~ 83626790 (-) |
G1025498 | NA | other | upstream | 1787469 | 83683265 ~ 83718776 (-) |
ypel1 | ypel1 | other | upstream | 1945686 | 83873900 ~ 83903039 (-) |