LOC110536491 (LOC106570936)


Basic Information

Item Value
gene id LOC110536491
gene name LOC106570936
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 82530236 ~ 82563337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936526.1
TCCTCCCCTGTCTTTACCTGTGGGACGCGCAAACAAGCTCAACTCAAGTGCCACATCCACTGCTCTCGTCATCGCTCACCGCCATATTGGATAAACTACCAGTGGAcggtggggtgggggggagaaTGGAGGCTGAGGGAAACACTGAAATATTGCTTATATGTCGCTAAATTGGTTGTGGTATAGTTGTCATTTACCAGAgaaaaaattaaatatatattttttaaaaataataattgggAGTCCGTAGCTGTATGTATCCGAGGGGGAAAATGTAAAGTGGTTTTCAAAAATCACGGCAGAGTAGTGAGAGACCGAGTCGAGCtgggtgtttttttttcttccccttcGTTGCTTGTTGGAACTTGTAGACATGACTTCCCTGATACAGCGGAGCTCGGGCCTAGTGCAGAGACGGACCGAGGCCTCTCGTACGGCTGCCGCCGACAAGGACCGAGGGTCCGGGGATGACGACTTCGAGCCCCGCCGCCGCTGCAGCGGGGAAGAACAAGAGGAACAGGACAAAGGAGACTCCAAAGAAACTCGACTCACCTTGATGGAAGAAGTACTACTCTTAGGATTAAAGGACCGCGAGgGCTACACGTCATTCTGGAACGACTGCATCTCGTCGGGGCTGCGTGGCTGCATGCTCATAGAGCTGGCCATCAGAGGACGACTACAGCTGGAGACCTGTGGCATGAGGAGGAAAAGCCTGCTCGCCAGGAAGGTGATCTGTAAGTCAGATGCTCCGACAGGGGACGTGCTATTGGACGAGGCTCTCAAACACGTGAAGGAGACCCAGCCCCCAGAGACGGTGCAGAGCTGGATTGAGCTGCTCAGCGGTGAGACGTGGAACCCTCTGAAGCTTCACTATCAGCTGAGGAACGTGAGGGAGCGCCTGGCCAAGAACCTGGTGGAAAAGGGCGTGCTGACCACGGAGAAACAGAACTTCCTCCTCTTCGACATGACCACTCACCCGCtcaccaacaacaacatcaaACAACGCCTCATCAAGAGGGTTCAGGAGGCCGTGTTGGAGAAATGGGTCAACGACCCGCACCGCATGGACAAACGGATGCTCGCCCTCATCTTCCTGGCCCACTCGTCTGATGTCCTGGAGAATGCCTTTTCCCCTCTGCTGGACGACCAGTATGACCTGGCCATGAAGAGAGTACGGCAGCTCCTGGACCTGGAGCCAGAGGGGGAGAGCACGAAGACCAACGCCAATGAGTTGTTGTGGGCCGTGGTGGCCGCCTTTACCAAGTGACCTACCACCTTCAGACAACAGAGGGTTGGGTTGGTTAATGACGATGGTGGTGGGTATGGTgtgaagggagagggagacaacaggacagtttgcgtgggacagagaggagagggagacgacAGGACAGTTTGCgtgggacagagaggagggagacgacAGGACAGTTTGcgtgggacagagaggagag

Function

NR:

description
PREDICTED: Golgi phosphoprotein 3-like

GO: NA

KEGG:

id description
K15620 GOLPH3, GPP34; golgi phosphoprotein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936526.1 True 1454 mRNA 0.54 4 82530236 82563337

Neighbor

gene id symbol gene type direction distance location
LOC110536484 LOC106570928 coding downstream 7854 82257489 ~ 82522382 (-)
LOC110536485 NA coding downstream 272779 82252528 ~ 82257457 (-)
LOC110535140 parp8 coding downstream 285062 82160968 ~ 82245174 (-)
LOC118937423 NA coding downstream 370993 82157654 ~ 82159243 (-)
LOC110536483 isl1 coding downstream 602022 81920366 ~ 81928214 (-)
LOC110536490 zfr coding upstream 18379 82581716 ~ 82619626 (-)
LOC118937424 NA coding upstream 304764 82868101 ~ 82871020 (-)
LOC118937425 NA coding upstream 309385 82872722 ~ 82873724 (-)
LOC100136308 LOC106570939 coding upstream 310442 82873779 ~ 82962031 (-)
LOC110536507 LOC105014547 coding upstream 500726 83064063 ~ 83288949 (-)
G1024469 NA non-coding downstream 2821 82527118 ~ 82527415 (-)
G1024447 NA non-coding downstream 17763 82512248 ~ 82512473 (-)
G1024444 NA non-coding downstream 22654 82507201 ~ 82507582 (-)
G1024443 NA non-coding downstream 23057 82506978 ~ 82507179 (-)
G1024438 NA non-coding downstream 30160 82499548 ~ 82500076 (-)
G1024491 NA non-coding upstream 49435 82612772 ~ 82613190 (-)
G1024458 LOC106570933 non-coding upstream 61759 82625096 ~ 82627337 (-)
G1024459 NA non-coding upstream 65033 82628370 ~ 82629232 (-)
G1024496 NA non-coding upstream 68944 82632281 ~ 82632519 (-)
G1024502 NA non-coding upstream 98696 82662033 ~ 82662821 (-)
G1023858 NA other downstream 615869 81912957 ~ 81914367 (-)
G1023618 NA other downstream 913007 81615253 ~ 81617939 (-)
G1023156 NA other downstream 1389657 81139984 ~ 81140579 (-)
G1023036 NA other downstream 1632233 80893902 ~ 80898003 (-)
G1025481 NA other upstream 998965 83562302 ~ 83565574 (-)
G1025467 NA other upstream 1058386 83544297 ~ 83626790 (-)
G1025498 NA other upstream 1152346 83683265 ~ 83718776 (-)
ypel1 ypel1 other upstream 1310563 83873900 ~ 83903039 (-)
G1026586 NA other upstream 2623989 85187326 ~ 85197500 (-)

Expression


Co-expression Network