LOC118937424


Basic Information

Item Value
gene id LOC118937424
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 82868101 ~ 82871020 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034761.1
tgacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactatagttgttgaaaaaaacgagttttaatgactccaacctaagtgtatgtaaacttccgacttcaactgtatattttgggAAACTATAGAATCATCAAAGTGATATGTGTAAATTAGTTATATTTATGTATTTTAGTATAATAACAGAAATCTGAGATAAAATATCTACAGACTCACGTATTTAGTACATAGTTAAGAACACATGTGATATTAATGCATTATGAATGATATCAGATGCCTCATTAGGGTTAGATGGCATTAATATTCCATTATTACTCCTGGCTTCATGGACCCTTATGTTCTCTTCTTCCCAGGCAGAAGGACCATCTCATTGGCAATATGGTGTAGATATATTTTAGaagaatttgtttttatttcggggaggggggggggggggggctctgctcTAATGTAAATCATGTCCTCAAAAGTTTGGTGAAAATGAAAAGCGTGGAATACTATTCTGAAATGAAACTGGACTCTTTTCATATATCAGCCATGAATGCAATCAATTATAAAATCCATGCCTTTGTAGACACAAGAATAAAGGGCATTTAAATAGAGCTTAATGTGatactataataactataataactagAGCATGCCAGCTAGGTGTCTGGAAGAGAAATCATTAAATGGAAATATTAATTTGAATTATTTAATTTGGATCTCAGTCTTAACTCCTCTTCCAACTTCGGAATGATCTAAAaggttttgtttttcaaatcttgTTTTCAGACATAAAAAATCATCCTCATTCCCTCTAAACATGTCATTTCGGAGGCCGTTTGGGAGTTAAAACGTTCTAGGGGACATGTTAATGACACCGTATATGGCATCCGTTGGAAAACTCATAAATTTGAAAAATGAGTCTGGCAACGATGGCCAATCAGAGGCCAGTCAAGGCCGTTGTTGCGGGGAAACACGGAGGCCAGTCACTGCAGGCCTTGCAGAAGGTAAATACATCCCCACCCAGCTCATTGGCAGCCTGCGGTTAAACCAGGGCCAATACTGGGTGATTCAAATGACATGATACTGATTGGAACCTTTTAAAGTGCAGTAGTTAAATGAAAAGCCTGTTGGAGTGGGAGACACATCATCTCATCCAATCCCACTCATTGCAACAACACATACAAGAGCTATGAGGTTTTCCTCCCAACTCTAAACTGTTTTTGTCATACGCCAATGTTAATCTCCGTGCGTCGTGCGTAGTACGTAGTATAATAAATACAACCTCGCAGTCCCAAAGTGTTCCCTTCTGAACGTTTATTGGCCTATTTCAAACTCCATTGTAAAATATACTTGATAAAGAATCAGTACGTTCCGAAACCAATTTTTCACTGCAATGACTAGCCGTTACAGCACATCCTTCAGGAAATGATCAAACGTGAACTCCGTGTTTAGGGAGTCATTGAGGTGCGTACTGACTTCCCTGAACACCCAGTAGGTGTGTTCACAGAGCATCTCAGAGTTGAGGTGGTTatctaggatcaggcccccctcctccctcttcttgtTCATTATGATGTTAACACTGATCCTGGATGTGGTCTCTCTTTCTGAATACTGGCCCAGTAGCAGTGTCAGGAAAATCCTGTATGTCATTGGTTACCCACCAGGATACAGGTCAgcatatctgaccctaacccaccaGGATGCATGTCAACATATCTGACCCCAACCCACCAGGATACAGGGCAacatatctgaccctaacccaccaGGATACAGGTCAtcatatctgaccctaacccaccaGGATACAGGTCATCATATCTGACCCTAATCCACCAGGATACAGGTCAACATATCTGACCCTAAACCACCAGGATACAGGCCAACATAtctgaccccaaccctaacccaccaGGATACAGGTCAACATAtctgaccccaaccctaacccaccaGGATACAGGTCAACATATCTGACCCCAATCCCAACCCACCAGGATACAGGTCAACATATCTGACCCCAACCCACCAGGATACAGGTCAACATAtctgaccccaaccctaacccaccaGGATACAGGTCAACATATCTGACTCCAACCATAACCCACCAGGATACAGGTCAACATAtctgaccccaaccctaacccaccaGGATACAGGTCAACGTATCTGaccctagacagacagacagacagacagacaaaacctgTGATCTAAACGTCTCTATCTTGAAAATTTGAAAATAGCTTTCAATTGTAAAATGTCATCGGGAGACATTTTACTTCCTGAAACTTCCTGAAACGGTGTCGGTACACTTTAATTTAGTTTAGCCTCTCATCGTCTCACAGGCCCCATTGAGGTGAAAAGGAAATGGGATTACATTTTCTAAAGGAATCCAGTTTTGTAAGCATCCACTAACCTACACCAAATACATGTACGAGCTTCGGCAACAGTCTTTGGGTCAATTAACTTCCTAAAAAAAAAATAGGGCCATTACATATAAGATGCCTGTCTTAACACGCCCCTCAAAGTGGACATTTCACAGTGAATTAAAAATCAGTTTGTATCATAATGAATTATATATAAAAGCTACATGAAGCTAGTGATGAGGACACGTAGTGATGTTAGTAAAGTATCTGCATATAATGTGTTAGTGTTATTTATGGTTTGATCTTTTATGGTTTCTTTTATTTAACCCCCTTGGTttgtgtaatatactgtattattttCTGAGATGACACATTATTAAGAAATATCTGCCTTTTACAGACTAAACTTGGCTTTTTAAGACATATATGTCAGAAATTTAACTTATTTACATTACCAACAtacattgtgtgtatatatatatatattgacaaATAAAATTGACAAAGTAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034761.1 True 2885 mRNA 0.40 2 82868101 82871020

Neighbor

gene id symbol gene type direction distance location
LOC110536490 zfr coding downstream 248475 82581716 ~ 82619626 (-)
LOC110536491 LOC106570936 coding downstream 304764 82530236 ~ 82563337 (-)
LOC110536484 LOC106570928 coding downstream 345719 82257489 ~ 82522382 (-)
LOC110536485 NA coding downstream 610644 82252528 ~ 82257457 (-)
LOC110535140 parp8 coding downstream 622927 82160968 ~ 82245174 (-)
LOC118937425 NA coding upstream 1702 82872722 ~ 82873724 (-)
LOC100136308 LOC106570939 coding upstream 2759 82873779 ~ 82962031 (-)
LOC110536507 LOC105014547 coding upstream 193043 83064063 ~ 83288949 (-)
LOC110536498 LOC105030224 coding upstream 470407 83341427 ~ 83361014 (-)
LOC118937426 LOC100380868 coding upstream 823660 83692703 ~ 83698034 (-)
G1024668 NA non-coding downstream 20871 82847020 ~ 82847230 (-)
G1024645 NA non-coding downstream 55724 82811730 ~ 82812377 (-)
G1024641 NA non-coding downstream 60547 82805764 ~ 82807554 (-)
G1024638 NA non-coding downstream 65282 82802579 ~ 82802819 (-)
G1024636 NA non-coding downstream 68974 82798866 ~ 82799127 (-)
G1024701 NA non-coding upstream 57675 82928695 ~ 82930745 (-)
G1024703 NA non-coding upstream 60895 82931915 ~ 82939451 (-)
G1024704 NA non-coding upstream 69630 82940650 ~ 82941321 (-)
G1024715 NA non-coding upstream 93565 82964585 ~ 82965060 (-)
G1024718 NA non-coding upstream 96121 82967141 ~ 82967361 (-)
G1023858 NA other downstream 953734 81912957 ~ 81914367 (-)
G1023618 NA other downstream 1250872 81615253 ~ 81617939 (-)
G1023156 NA other downstream 1727522 81139984 ~ 81140579 (-)
G1023036 NA other downstream 1970098 80893902 ~ 80898003 (-)
G1025481 NA other upstream 691282 83562302 ~ 83565574 (-)
G1025467 NA other upstream 750703 83544297 ~ 83626790 (-)
G1025498 NA other upstream 844663 83683265 ~ 83718776 (-)
ypel1 ypel1 other upstream 1002880 83873900 ~ 83903039 (-)
G1026586 NA other upstream 2316306 85187326 ~ 85197500 (-)

Expression


Co-expression Network