LOC110535142 (mapk1)


Basic Information

Item Value
gene id LOC110535142
gene name mapk1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 83922608 ~ 83982640 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936558.1
TCCATAGTGTCTCAGTGTAGCTAGCATACCGCAGTCAGCCTGTGTGTACAGCAGCGCAGGAAGACCACTTTATCATACGGAGGACTTCAGAAAGGCTCCCGGTAATAACGTTGTTACAGCGGTGACTTTTCCTTGTGGCCGTGAAGAACGTGTAAAAAGGCAGCCGGTTTTCACAATGGCGACAGCTGCGGTTTCTGCCAGTGGCCCCAACCCCGGAACCGGAGCTGAGTTGGTCCGAGGACAGGCCTTCGATGTCGGGCCCCGGTACCACAATCTGTCGTATATCGGTGAGGGCGCCTACGGAACGGTGTGctctgcGTATTGCCGTGACAACAAGGTCCGCGTGGCGATAAAGAAGATCAGTCCGTTTGAGCACCAGACATACTGCCAGAGGACTCTGAGAGAGATTAAGATCCTGCTGCGCTTCAAACATGAGAACATCATCAGCATCAACGACATCATCCTCACGCCCTCCATCGATCAGATGAAGGACGTCTACATAGTGCAGGACCTGATGGAGACAGACCTGTATAAGCTGCTGAAGACCCAGCGCCTGAGCAACGATCACATCTGTTACTTCCTGTACCAGATCCTGAGAGGCCTGAAGTACATCCATTCTGCCAACGTCCTGCACCGCGACCTCAAACCCTCCAACCTGCTGCTCAATACCACCTGTGATCTAAAGATCTGTGACTTCGGTCTGGCGCGTGTGGCTGACCCAGACCACGACCACACAGGCTTCCTGACAGAGTATGTAGCTACTCGCTGGTACCGGGCGCCTGAGATCATGCTCAACTCCAAGggttACACCAAGTCTATTGATATCTGGTCTGTGGGCTGCATCCTGGCTGAAATGCTCTCCAATAGACCCATCTTCCCCGGGAAGCACTACCTGGACcagctcaaccacatactgggTATCCTAGGGTCTCCTTCCCAGGAGGATCTGAACTGCATCATTAACATCAAGGCCAGGAACTACCTGCTGTCTCTCCCGCTGCGCTGCAAGGTCCCCTGGAACAGCCTCTTCCCCAAAGCCGACTCCAAAGCTCTGGACCTGCTGGATAAGATGTTGACCTTTAACCCCCACAAGAGGATCGAGGTGGAGGCGGCTCTGGCTCACCCTTACCTGGAGCAGTACTACGACCCTACAGATGAGCCTGTAACAGAGACTCCCTTCAAGTTTGCGATGGAGCTTGATGATCTCCCCAAAGAGACCCTGAAGGAGCTGATCTTTGAAGAGACGGCTcgcttcaacacagtctgcaggCCCTAACCCGTACACACAGatcAGACTCTGGACTCCtttcctccacctcttctctccacCTTTCCGACATGTGCTGTGGTTCCTCCTGTCTTCAGCATTTCCTGTATACTTCCTACCTCCCCTAGTCAGTCAAACCACCATGCTCAGGAACAGTGTCAGgaatcaacctctctctctctgctctctctgtctctccctctgcctatGGGGTAAGGGGGCGTCACTTGTTGGCTTATCGTTGAGGAGATGCTTGTCTTGTGTGTTTTAAGCTAAGATCAACAgaagtctgtgtcccaaatggtgccctattccctaatatAGTGTTCTACTtttagaaagtagtgcactatatagggaatagggggccatagggctctggtctaaagtagtgcactatatatggaatagggtgccatttgggacacaggtcTGGCTCGGGAGACACCTGTTCAACCAGCTTTGGTTTATGGTTAAGTCCTCATTGTTACTCCTGGCCCGCGCAGCTGAAGCGGTGGTACACAGTTGTGGGGTTTGTTTTCAAAAGCAGATTTTTTTTCACCTCGCCGGCTCTGGGATTCATACAGCGacctttcaattactggcccaactctcttaaccactaggctacctaacgctctctcctcctcccaacggcccggtctccctctctctctctcctcccaacggcccggtctctctctctctcctcccaa
>XM_036936559.1
ATCCATAGTGTCTCAGTGTAGCTAGCATACCGCAGTCAGCCTGTGTGTACAGCAGCGCAGGAAGACCACTTTATCATACGGAGGACTTCAGAAAGGCTCCCGGTAATAACGTTGTTACAGCGGTGACTTTTCCTTGTGGCCGTGAAGAACGTGTAAAAAGGCAGCCGGTTTTCACAATGGCGACAGCTGCGGTTTCTGCCAGTGGCCCCAACCCCGGAACCGGAGCTGAGTTGGTCCGAGGACAGGCCTTCGATGTCGGGCCCCGGTACCACAATCTGTCGTATATCGGTGAGGGCGCCTACGGAACGGTGTGctctgcGTATTGCCGTGACAACAAGGTCCGCGTGGCGATAAAGAAGATCAGTCCGTTTGAGCACCAGACATACTGCCAGAGGACTCTGAGAGAGATTAAGATCCTGCTGCGCTTCAAACATGAGAACATCATCAGCATCAACGACATCATCCTCACGCCCTCCATCGATCAGATGAAGGACGTCTACATAGTGCAGGACCTGATGGAGACAGACCTGTATAAGCTGCTGAAGACCCAGCGCCTGAGCAACGATCACATCTGTTACTTCCTGTACCAGATCCTGAGAGGCCTGAAGTACATCCATTCTGCCAACGTCCTGCACCGCGACCTCAAACCCTCCAACCTGCTGCTCAATACCACCTGTGATCTAAAGATCTGTGACTTCGGTCTGGCGCGTGTGGCTGACCCAGACCACGACCACACAGGCTTCCTGACAGAGTATGTAGCTACTCGCTGGTACCGGGCGCCTGAGATCATGCTCAACTCCAAGggttACACCAAGTCTATTGATATCTGGTCTGTGGGCTGCATCCTGGCTGAAATGCTCTCCAATAGACCCATCTTCCCCGGGAAGCACTACCTGGACcagctcaaccacatactgggTATCCTAGGGTCTCCTTCCCAGGAGGATCTGAACTGCATCATTAACATCAAGGCCAGGAACTACCTGCTGTCTCTCCCGCTGCGCTGCAAGGTCCCCTGGAACAGCCTCTTCCCCAAAGCCGACTCCAAAGCTCTGGACCTGCTGGATAAGATGTTGACCTTTAACCCCCACAAGAGGATCGAGGTGGAGGCGGCTCTGGCTCACCCTTACCTGGAGCAGTACTACGACCCTACAGATGAGCCTGTAACAGAGACTCCCTTCAAGTTTGCGATGGAGCTTGATGATCTCCCCAAAGAGACCCTGAAGGAGCTGATCTTTGAAGAGACGGCTcgcttcaacacagtctgcaggCCCTAACCCGTACACACAGGTACAGTCTGCAGGCCCTAACCCGTACACACAGatcAGACTCTGGACTCCtttcctccacctcttctctccacCTTTCCGACATGTGCTGTGGTTCCTCCTGTCTTCAGCATTTCCTGTATACTTCCTACCTCCCCTAGTCAGTCAAACCACCATGCTCAGGAACAGTGTCAGgaatcaacctctctctctctgctctctctgtctctccctctgcctatGGGGTAAGGGGGCGTCACTTGTTGGCTTATCGTTGAGGAGATGCTTGTCTTGTGTGTTTTAAGCTAAGATCAACAgaagtctgtgtcccaaatggtgccctattccctaatatAGTGTTCTACTtttagaaagtagtgcactatatagggaatagggggccatagggctctggtctaaagtagtgcactatatatggaatagggtgccatttgggacacaggtcTGGCTCGGGAGACACCTGTTCAACCAGCTTTGGTTTATGGTTAAGTCCTCATTGTTACTCCTGGCCCGCGCAGCTGAAGCGGTGGTACACAGTTGTGGGGTTTGTTTTCAAAAGCAGATTTTTTTTCACCTCGCCGGCTCTGGGATTCATACAGCGacctttcaattactggcccaactctcttaaccactaggctacctaacgctctctcctcctcccaacggcccggtctccctctctctctctcctcccaacggcccggtctctctctctctcctcccaa
>XM_036936560.1
ATCCATAGTGTCTCAGTGTAGCTAGCATACCGCAGTCAGCCTGTGTGTACAGCAGCGCAGGAAGACCACTTTATCATACGGAGGACTTCAGAAAGGCTCCCGGTAATAACGTTGTTACAGCGGTGACTTTTCCTTGTGGCCGTGAAGAACGTGTAAAAAGGCAGCCGGTTTTCACAATGGCGACAGCTGCGGTTTCTGCCAGTGGCCCCAACCCCGGAACCGGAGCTGAGTTGGTCCGAGGACAGGCCTTCGATGTCGGGCCCCGGTACCACAATCTGTCGTATATCGGTGAGGGCGCCTACGGAACGGTGTGctctgcGTATTGCCGTGACAACAAGGTCCGCGTGGCGATAAAGAAGATCAGTCCGTTTGAGCACCAGACATACTGCCAGAGGACTCTGAGAGAGATTAAGATCCTGCTGCGCTTCAAACATGAGAACATCATCAGCATCAACGACATCATCCTCACGCCCTCCATCGATCAGATGAAGGACGTCTACATAGTGCAGGACCTGATGGAGACAGACCTGTATAAGCTGCTGAAGACCCAGCGCCTGAGCAACGATCACATCTGTTACTTCCTGTACCAGATCCTGAGAGGCCTGAAGTACATCCATTCTGCCAACGTCCTGCACCGCGACCTCAAACCCTCCAACCTGCTGCTCAATACCACCTGTGATCTAAAGATCTGTGACTTCGGTCTGGCGCGTGTGGCTGACCCAGACCACGACCACACAGGCTTCCTGACAGAGTATGTAGCTACTCGCTGGTACCGGGCGCCTGAGATCATGCTCAACTCCAAGggttACACCAAGTCTATTGATATCTGGTCTGTGGGCTGCATCCTGGCTGAAATGCTCTCCAATAGACCCATCTTCCCCGGGAAGCACTACCTGGACcagctcaaccacatactgggTATCCTAGGGTCTCCTTCCCAGGAGGATCTGAACTGCATCATTAACATCAAGGCCAGGAACTACCTGCTGTCTCTCCCGCTGCGCTGCAAGGTCCCCTGGAACAGCCTCTTCCCCAAAGCCGACTCCAAAGCTCTGGACCTGCTGGATAAGATGTTGACCTTTAACCCCCACAAGAGGATCGAGGTGGAGGCGGCTCTGGCTCACCCTTACCTGGAGCAGTACTACGACCCTACAGATGAGCCTGTAACAGAGACTCCCTTCAAGTTTGCGATGGAGCTTGATGATCTCCCCAAAGAGACCCTGAAGGAGCTGATCTTTGAAGAGACGGCTcgcttcaacacagtctgcaggCCCTAACCCGTACACACAGatcctcaaaagattctacagctgcaccatcgagagcatcctgaccggttgcttcaccgcctggtatggcaac
>XM_036936556.1
ATCCATAGTGTCTCAGTGTAGCTAGCATACCGCAGTCAGCCTGTGTGTACAGCAGCGCAGGAAGACCACTTTATCATACGGAGGACTTCAGAAAGGCTCCCGGTAATAACGTTGTTACAGCGGTGACTTTTCCTTGTGGCCGTGAAGAACGTGTAAAAAGGCAGCCGGTTTTCACAATGGCGACAGCTGCGGTTTCTGCCAGTGGCCCCAACCCCGGAACCGGAGCTGAGTTGGTCCGAGGACAGGCCTTCGATGTCGGGCCCCGGTACCACAATCTGTCGTATATCGGTGAGGGCGCCTACGGAACGGTGTGctctgcGTATTGCCGTGACAACAAGGTCCGCGTGGCGATAAAGAAGATCAGTCCGTTTGAGCACCAGACATACTGCCAGAGGACTCTGAGAGAGATTAAGATCCTGCTGCGCTTCAAACATGAGAACATCATCAGCATCAACGACATCATCCTCACGCCCTCCATCGATCAGATGAAGGACGTCTACATAGTGCAGGACCTGATGGAGACAGACCTGTATAAGCTGCTGAAGACCCAGCGCCTGAGCAACGATCACATCTGTTACTTCCTGTACCAGATCCTGAGAGGCCTGAAGTACATCCATTCTGCCAACGTCCTGCACCGCGACCTCAAACCCTCCAACCTGCTGCTCAATACCACCTGTGATCTAAAGATCTGTGACTTCGGTCTGGCGCGTGTGGCTGACCCAGACCACGACCACACAGGCTTCCTGACAGAGTATGTAGCTACTCGCTGGTACCGGGCGCCTGAGATCATGCTCAACTCCAAGggttACACCAAGTCTATTGATATCTGGTCTGTGGGCTGCATCCTGGCTGAAATGCTCTCCAATAGACCCATCTTCCCCGGGAAGCACTACCTGGACcagctcaaccacatactgggTATCCTAGGGTCTCCTTCCCAGGAGGATCTGAACTGCATCATTAACATCAAGGCCAGGAACTACCTGCTGTCTCTCCCGCTGCGCTGCAAGGTCCCCTGGAACAGCCTCTTCCCCAAAGCCGACTCCAAAGCTCTGGACCTGCTGGATAAGATGTTGACCTTTAACCCCCACAAGAGGATCGAGGTGGAGGCGGCTCTGGCTCACCCTTACCTGGAGCAGTACTACGACCCTACAGATGAGCCTGTAACAGAGACTCCCTTCAAGTTTGCGATGGAGCTTGATGATCTCCCCAAAGAGACCCTGAAGGAGCTGATCTTTGAAGAGACGGCTcgcttcaacacagtctgcaggCCCTAACCCGTACACACAGGTACAGTCTGCAGGCCCTAACCCGTACACACAGGTACAAACAGCTTCAAACAGTCTGCAGgccctaacccatacacacaggtacaaacagcttcaacacagtctgcaggccctaacccatacacacaggtacagacagcttcaacacagtctgcaggccctaacccatacacacaggtacaaacagcttcaacacagtctgcaggCCCTAACCCATACAGACagcttcaacacagtctgcaggccctaacccatacacacaggtacagacagcttcaacacagtctgcaggccctaacccatacacacaggtacagacagcttcaacacagtctgcaggCCCTAACCCATACAGACagcttcaacacagtctgcaggCCCTAACCCATACAGACagcttcaacacagtctgcaggccctaacccatacacacaggtaca
>XM_036936561.1
ATCCATAGTGTCTCAGTGTAGCTAGCATACCGCAGTCAGCCTGTGTGTACAGCAGCGCAGGAAGACCACTTTATCATACGGAGGACTTCAGAAAGGCTCCCGGTAATAACGTTGTTACAGCGGTGACTTTTCCTTGTGGCCGTGAAGAACGTGTAAAAAGGCAGCCGGTTTTCACAATGGCGACAGCTGCGGTTTCTGCCAGTGGCCCCAACCCCGGAACCGGAGCTGAGTTGGTCCGAGGACAGGCCTTCGATGTCGGGCCCCGGTACCACAATCTGTCGTATATCGGTGAGGGCGCCTACGGAACGGTGTGctctgcGTATTGCCGTGACAACAAGGTCCGCGTGGCGATAAAGAAGATCAGTCCGTTTGAGCACCAGACATACTGCCAGAGGACTCTGAGAGAGATTAAGATCCTGCTGCGCTTCAAACATGAGAACATCATCAGCATCAACGACATCATCCTCACGCCCTCCATCGATCAGATGAAGGACGTCTACATAGTGCAGGACCTGATGGAGACAGACCTGTATAAGCTGCTGAAGACCCAGCGCCTGAGCAACGATCACATCTGTTACTTCCTGTACCAGATCCTGAGAGGCCTGAAGTACATCCATTCTGCCAACGTCCTGCACCGCGACCTCAAACCCTCCAACCTGCTGCTCAATACCACCTGTGATCTAAAGATCTGTGACTTCGGTCTGGCGCGTGTGGCTGACCCAGACCACGACCACACAGGCTTCCTGACAGAGTATGTAGCTACTCGCTGGTACCGGGCGCCTGAGATCATGCTCAACTCCAAGggttACACCAAGTCTATTGATATCTGGTCTGTGGGCTGCATCCTGGCTGAAATGCTCTCCAATAGACCCATCTTCCCCGGGAAGCACTACCTGGACcagctcaaccacatactgggTATCCTAGGGTCTCCTTCCCAGGAGGATCTGAACTGCATCATTAACATCAAGGCCAGGAACTACCTGCTGTCTCTCCCGCTGCGCTGCAAGGTCCCCTGGAACAGCCTCTTCCCCAAAGCCGACTCCAAAGCTCTGGACCTGCTGGATAAGATGTTGACCTTTAACCCCCACAAGAGGATCGAGGTGGAGGCGGCTCTGGCTCACCCTTACCTGGAGCAGTACTACGACCCTACAGATGAGCCTGTAACAGAGACTCCCTTCAAGTTTGCGATGGAGCTTGATGATCTCCCCAAAGAGACCCTGAAGGAGCTGATCTTTGAAGAGACGGCTcgcttcaacacagtctgcaggCCCTAACCCGTACACACAGGTACAAACAGCTTCAAACAGTCTGCAGgccctaacccatacacacaggtacaaacagcttcaacacagtctgcaggccctaacccatacacacaggtacagacagcttcaacacagtctgcaggccctaacccatacacacaggtacaaacagcttcaacacagtctgcaggCCCTAACCCATACAGACagcttcaacacagtctgcaggccctaacccatacacacaggtacagacagcttcaacacagtctgcaggccctaacccatacacacaggtacagacagcttcaacacagtctgcaggCCCTAACCCATACAGACagcttcaacacagtctgcaggCCCTAACCCATACAGACagcttcaacacagtctgcaggccctaacccatacacacaggtaca
>XM_036936562.1
GTATCCATAGTGTCTCAGTGTAGCTAGCATACCGCAGTCAGCCTGTGTGTACAGCAGCGCAGGAAGACCACTTTATCATACGGAGGACTTCAGAAAGGCTCCCGGTAATAACGTTGTTACAGCGGTGACTTTTCCTTGTGGCCGTGAAGAACGTGTAAAAAGGCAGCCGGTTTTCACAATGGCGACAGCTGCGGTTTCTGCCAGTGGCCCCAACCCCGGAACCGGAGCTGAGTTGGTCCGAGGACAGGCCTTCGATGTCGGGCCCCGGTACCACAATCTGTCGTATATCGGTGAGGGCGCCTACGGAACGGTGTGctctgcGTATTGCCGTGACAACAAGGTCCGCGTGGCGATAAAGAAGATCAGTCCGTTTGAGCACCAGACATACTGCCAGAGGACTCTGAGAGAGATTAAGATCCTGCTGCGCTTCAAACATGAGAACATCATCAGCATCAACGACATCATCCTCACGCCCTCCATCGATCAGATGAAGGACGTCTACATAGTGCAGGACCTGATGGAGACAGACCTGTATAAGCTGCTGAAGACCCAGCGCCTGAGCAACGATCACATCTGTTACTTCCTGTACCAGATCCTGAGAGGCCTGAAGTACATCCATTCTGCCAACGTCCTGCACCGCGACCTCAAACCCTCCAACCTGCTGCTCAATACCACCTGTGATCTAAAGATCTGTGACTTCGGTCTGGCGCGTGTGGCTGACCCAGACCACGACCACACAGGCTTCCTGACAGAGTATGTAGCTACTCGCTGGTACCGGGCGCCTGAGATCATGCTCAACTCCAAGggttACACCAAGTCTATTGATATCTGGTCTGTGGGCTGCATCCTGGCTGAAATGCTCTCCAATAGACCCATCTTCCCCGGGAAGCACTACCTGGACcagctcaaccacatactgggTATCCTAGGGTCTCCTTCCCAGGAGGATCTGAACTGCATCATTAACATCAAGGCCAGGAACTACCTGCTGTCTCTCCCGCTGCGCTGCAAGGTCCCCTGGAACAGCCTCTTCCCCAAAGCCGACTCCAAAGCTCTGGACCTGCTGGATAAGATGTTGACCTTTAACCCCCACAAGAGGATCGAGGTGGAGGCGGCTCTGGCTCACCCTTACCTGGAGCAGTACTACGACCCTACAGATGAGCCTGTAACAGAgactctaacctcctctctttcTGTTAGCCTGTAACAGAGactctaacctcctctctgtctctctgttagcCTGTAACAGAgactctaacctcctctctctctggtagcCTGTAACAGAGactct

Function

symbol description
mapk1 Predicted to enable MAP kinase activity. Acts upstream of or within gastrulation. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including EVL; brain; cardiovascular system; retina; and superficial blastomere. Human ortholog(s) of this gene implicated in Noonan syndrome 13; adenocarcinoma (multiple); pulmonary hypertension; and renal cell carcinoma. Orthologous to human MAPK1 (mitogen-activated protein kinase 1).

NR:

description
PREDICTED: mitogen-activated protein kinase 1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007369 gastrulation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG:

id description
K04371 ERK, MAPK1_3; mitogen-activated protein kinase 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936558.1 False 1983 mRNA 0.53 8 83922608 83982637
XM_036936559.1 False 2017 mRNA 0.53 8 83922608 83982638
XM_036936560.1 False 1362 mRNA 0.54 8 83924517 83982638
XM_036936556.1 False 1729 mRNA 0.53 7 83926383 83982638
XM_036936561.1 False 1696 mRNA 0.53 8 83926383 83982638
XM_036936562.1 True 1297 mRNA 0.53 7 83927057 83982640

Neighbor

gene id symbol gene type direction distance location
LOC110536511 NA coding downstream 2979 83914813 ~ 83921303 (-)
ypel1 ypel1 coding downstream 20244 83873900 ~ 83903039 (-)
LOC118937426 LOC100380868 coding downstream 226002 83692703 ~ 83698034 (-)
LOC110536498 LOC105030224 coding downstream 561594 83341427 ~ 83361014 (-)
LOC110536507 LOC105014547 coding downstream 633659 83064063 ~ 83288949 (-)
grsf1 grsf1 coding upstream 62872 84045512 ~ 84084200 (-)
adamts3 LOC107719190 coding upstream 252653 84235293 ~ 84426152 (-)
smarca2 NA coding upstream 519245 84501885 ~ 84719806 (-)
dmrt2a LOC106570979 coding upstream 978651 84961291 ~ 84965767 (-)
LOC118937429 dmrt3 coding upstream 1063474 85046114 ~ 85122372 (-)
G1025630 NA non-coding downstream 6405 83911274 ~ 83916203 (-)
G1025645 NA non-coding downstream 12293 83909816 ~ 83910315 (-)
G1025644 NA non-coding downstream 12902 83909353 ~ 83909706 (-)
G1025643 NA non-coding downstream 14382 83907400 ~ 83908226 (-)
G1025693 NA non-coding upstream 25252 84007892 ~ 84009482 (-)
G1025701 rufy3 non-coding upstream 37606 84020246 ~ 84024491 (-)
G1025684 NA non-coding upstream 49132 84031772 ~ 84036310 (-)
G1025685 NA non-coding upstream 61134 84043774 ~ 84047257 (-)
G1025708 NA non-coding upstream 77713 84060353 ~ 84080646 (-)
G1025498 NA other downstream 204000 83683265 ~ 83718776 (-)
G1025467 NA other downstream 295818 83544297 ~ 83626790 (-)
G1025481 NA other downstream 357034 83562302 ~ 83565574 (-)
LOC110536484 LOC106570928 other downstream 1663643 82257489 ~ 82522382 (-)
G1026586 NA other upstream 1204686 85187326 ~ 85197500 (-)
G1026978 NA other upstream 1630712 85613352 ~ 85614375 (-)

Expression


Co-expression Network