XLOC_028996 (znf979)


Basic Information

Item Value
gene id XLOC_028996
gene name znf979
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 39919216 ~ 39942347 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00056076
aagaaaagacttttattttggcgtgtgacgtcatcaggcggcgccgcttcagcgctgtgattcaactggagaaagggcattttttattgttttattcgttttaaacaggataaagtgtccaaacacagaggaaaactcctgctgaagtgactgatctccacactgttataaagatggcgtttattaaagaggagagtgaagatttGAAAATCGAAGAGACATTCtcagtcaaacatgaagatctgaaggaacaaacagaccTAGTTAAAGAGTATGagaggagtaaagaggaggaacatcatgtcaaaattgaagacaaaactcatttagagactgatgatattttaaaaatgagagaCAAGCGTTGTTTTACCTgcaatcagtgtgggaagagtttggcaaacaaaagcaaactaaagatccacatgaggatccacaatagggagaaactattcacatgcactcagtgtgggaagaatttcaaccaatcatcaaaccttaatcaacacatgaggatccacactggggagaagctattcacatgcacccagtgtgggaagagtttcagcaactcagcaaaccttaatcaacacatgaggattcacactggagagaaaccattcacatgtactcagtgtgggaagagtttcagccaatcatcaaaccttaatcatcacatgaggatccacactggagagaaaccattcacatgcagtcagtgtgggaagagtttcagccaatcttcatcccttaatctacacatgaggatacacactggagagaaaccattcacatgtactcagtgtggtaagagtttcagccaatcatcaatccttaatatacacatgaggaaccacactggagagaaaccattcacatgccttcagtgtgggaagagttttagccaatcaacataccttaatcaacacatgaggatccacactggggagaacctattcacatgcacccagtgtgggaagagtttcagcaactcagcaaaccttaatctacacatgaggattcacactggagagaaaccattcacatgtactcagtgtgggaagagtttcagccaatcatcaaaccttaatatacacatgaggattcacactggagagaaaccattcacatgcagtcagtgtgggaagagtttcagccaatcaccaTACCTTAAtcatcacatgaggatccacactggagagaaaccattcacatgcagtcagtgtgggaagagtttcagccaatcatcatcccttaatctacacatgaggatccacactggagagaaaccattcacatgtactcagtgtggtaagagtttcagccaatcatcaaaccttaatatacacatgaggaaccacactggagagaaaccattcacatgccttcagtgtgggaagagttttagccgatcatcatcccttaatcgacacatgatgatccacactggagagaaagagTTTATGTGCTTGAAGTGTGAGaatacttttattacagctgcagaATTGAAACGCCACCAGagggttcacactggagaaaaaccgtacaagtgttcacagtgcagtaagaggtttgctcgctcaggaaccctgaaaacacatgagaggattcacactggagagaaactgtagACATGATCAGTGTGTACAAAGTTTCACTTAATCAgggcagcttaagaaacacatgggaTGGTTTTTGGTAAGGCGCCGACACGTGTAGCAGCATAGAAAGAGCGCT

Function

symbol description
znf979 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109211

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00056076 True 1737 mRNA 0.42 3 39919216 39942347

Neighbor

gene id symbol gene type direction distance location
XLOC_028995 CR749167.1 coding downstream 89397 39829175 ~ 39829819 (-)
XLOC_028994 NA coding downstream 205266 39712778 ~ 39713950 (-)
XLOC_028993 NA coding downstream 217030 39643624 ~ 39702186 (-)
XLOC_028990 si:dkey-156k2.4 coding downstream 431391 39372775 ~ 39487825 (-)
XLOC_028997 si:ch211-215p11.1 coding upstream 49906 39992253 ~ 40008875 (-)
XLOC_028998 NA coding upstream 76626 40018973 ~ 40019703 (-)
XLOC_028999 si:dkey-22h13.2 coding upstream 415166 40357513 ~ 40364889 (-)
XLOC_029000 si:dkey-22h13.3 coding upstream 459670 40402017 ~ 40407853 (-)
XLOC_029001 NA coding upstream 546217 40488564 ~ 40497140 (-)
XLOC_028992 BX548067.1 non-coding downstream 449507 39451635 ~ 39469709 (-)
XLOC_028989 BX548067.3 non-coding downstream 555001 39364038 ~ 39364215 (-)
XLOC_029002 NA non-coding upstream 555470 40497817 ~ 40503730 (-)
XLOC_029004 NA non-coding upstream 609812 40552159 ~ 40598742 (-)
XLOC_029006 NA non-coding upstream 769515 40711862 ~ 40937754 (-)

Expression


Co-expression Network