G1024401


Basic Information

Item Value
gene id G1024401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 82440347 ~ 82441209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1165737
CATTCATTGACTTGTGTTCGTCATGTTGATTTGTTGAGAAAATATGTCAGTATGTTTGTCTGCACTGGCAAATCAAAAGGTCCGACCCAGGGGTAATTTGGAGCCAAAGCCTAACCAAATCAGATCTGTGTACGTTTTTCGTATTAATcctgcattgatgtcaatgggagacatgAATATTCTAGAGACACAAAGAACCACAATTAGTATTAGACCACTGTACACCTGGGCCAAGACAGATGCATTTCCTCACCTCATATCCAACATAGGAATAGATATTTAGCAGTATCACCAGGGGGAAGGTCTGATTCTTGAATAACATATCCtggcagagacacagagcagcCTGGTTTCTGGTCCTGGTTTCTGGTCCTGGTTTCTGGTCCTGGTTTCTGGTCCTGGTTTCTGGTCTCCTGGTTTCTGGTCCTGGTTTCCTATTGTATAATGATGAATTGAATGAAAGGAGGGAATCCGTATCATATCTGTATCTCACAGCTGTGACCTCAAGGCTTGGAAACCCAACACCCAAGGTACGTTTCAGTCATTTACCagacagacactcttatccagagcgacttaaagttagtgcattcatcttaagatagctaggtgagacaaacacatatcacaagtatagaaagtacattttcccctcaataaagtagttatcaacaaagtcagagctagtaggataaaaaaaaaaaaagtgaaataaaaaaaatgatttgatgaatttaagatactctttgtaGAGGTAGTGTTTCAGATGTTCtcagaagatggacagggactctgctgtcctagtttACCCCTTACTCTGCTGTCCTAGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1165737 True 832 lncRNA 0.41 2 82440347 82441209

Neighbor

gene id symbol gene type direction distance location
LOC110536485 NA coding downstream 182890 82252528 ~ 82257457 (-)
LOC110535140 parp8 coding downstream 195173 82160968 ~ 82245174 (-)
LOC118937423 NA coding downstream 281104 82157654 ~ 82159243 (-)
LOC110536483 isl1 coding downstream 512133 81920366 ~ 81928214 (-)
LOC118937459 NA coding downstream 629234 81810059 ~ 81811117 (-)
LOC110536491 LOC106570936 coding upstream 89027 82530236 ~ 82563337 (-)
LOC110536490 zfr coding upstream 140507 82581716 ~ 82619626 (-)
LOC118937424 NA coding upstream 426892 82868101 ~ 82871020 (-)
LOC118937425 NA coding upstream 431513 82872722 ~ 82873724 (-)
LOC100136308 LOC106570939 coding upstream 432570 82873779 ~ 82962031 (-)
G1024393 NA non-coding downstream 13676 82426099 ~ 82426671 (-)
G1024391 NA non-coding downstream 23917 82415861 ~ 82416430 (-)
G1024368 NA non-coding downstream 80890 82354214 ~ 82359457 (-)
G1024359 NA non-coding downstream 111481 82326686 ~ 82328866 (-)
G1024408 NA non-coding upstream 8603 82449812 ~ 82451094 (-)
G1024410 NA non-coding upstream 12701 82453910 ~ 82455412 (-)
G1024418 NA non-coding upstream 26772 82467981 ~ 82468273 (-)
G1024437 NA non-coding upstream 57937 82499146 ~ 82499546 (-)
G1024438 NA non-coding upstream 58339 82499548 ~ 82500076 (-)
LOC110536484 LOC106570928 other downstream 181382 82257489 ~ 82522382 (-)
G1023858 NA other downstream 525980 81912957 ~ 81914367 (-)
G1023618 NA other downstream 823118 81615253 ~ 81617939 (-)
G1023156 NA other downstream 1299768 81139984 ~ 81140579 (-)
G1023036 NA other downstream 1542344 80893902 ~ 80898003 (-)
G1025481 NA other upstream 1121093 83562302 ~ 83565574 (-)
G1025467 NA other upstream 1180514 83544297 ~ 83626790 (-)
G1025498 NA other upstream 1274474 83683265 ~ 83718776 (-)
ypel1 ypel1 other upstream 1432691 83873900 ~ 83903039 (-)
G1026586 NA other upstream 2746117 85187326 ~ 85197500 (-)

Expression


Co-expression Network