G1025452


Basic Information

Item Value
gene id G1025452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 83494517 ~ 83504865 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1167034
aaccatgggttgggctctactcagacctgtaaccaggggttatctctactcagacctggaacaaggggttggactctacctagacctgtaaccagggcttgggctctactcagagctttaaccaaggggttggactctactcagacctgtaaccagggattgggctctactcagagcttgaaccaggggttggactctactcagacctggaaccaggggttggactctactcagacctggaaccaggggttgggctctactcagacctggaaccaggggttgggctccaCTCAGaactggaaccaggggttgggttctactcagacctggaaccaggggttgggctctactcagacctgtaaccaggggttgggctctactcagagctggaaccaggggctggactctactcagagctggaaccaggggttggactctactcagagcttgaaccagggattgggctctactcagagctggaaccaggggttgggctcttctcagacctggaaccaggggttgggctctactcagacctggaaccatgggttgggctctactcagacctggaaccaggggttgggctcttctcagacctggaaccaggggttgggctccaCTCAGACCTAGAAccatgggttgggctctactcagacctggaaccaggggttgggctctactcagacctggaaccaggggttgggctctactcaggaaccaggggttggactccactcagagctggaaccagggattggactccactcagagctggaaccagggattggactctactcaataaccagggattggactctactcagagctggaaccagggaatggactctactcagagctggaaccaggggttggactcaactcagacctgtaaccatgggttgggctctactcagacctgtaaccaggggttatctctactcagacctggaacaagGGGTTGGACTCTTCCTAGACCTGTAACCAGggcttgggctctactcagagcttgaaccaaggggttggactctactcagagcttgaaccaggagtTGGGCTGTAcacagagcttgaaccaggggttggactctactcagacctgtaaccagggattgggctctactcagaacTTGAACCAGGGGTttgactctactcagacctggaaccaggggttggactctactcagacctggaaccaggggttgggctctactcagacctggaaccaggggttgggctctactcagacctggaaccaggggttgggttctactcagacctgtaaccaggggttgggctctactcagacctgtaaccaggggtttggctctactcagagctggaaccaggggctggactctactcagagctggaaccaggggttggactctcctcagagcttgaaccaggggttggactccactcagagctggaaccagtgATTGGACTCTACAcaagaaccagggattggactctactcagacctggaactagggattgggctctactcagagctggaaccaggggttgggctctactcagagctggaaccaggggttgggctctaatcagagctggaaccaggggttggactccactCAGAgctggaaccagggaatggactctactcagagctggaaccaggggttggactctactgaagaaccaggggttgggctctactcagagctgtaaccaggggttggactctactcagacctgtaaccatgGGCTTGGGccctactcagacctg

Function

NR:

description
PREDICTED: basic salivary proline-rich protein 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1167034 True 1750 lncRNA 0.56 3 83494517 83504865

Neighbor

gene id symbol gene type direction distance location
LOC110536498 LOC105030224 coding downstream 133503 83341427 ~ 83361014 (-)
LOC110536507 LOC105014547 coding downstream 205568 83064063 ~ 83288949 (-)
LOC100136308 LOC106570939 coding downstream 532486 82873779 ~ 82962031 (-)
LOC118937425 NA coding downstream 620793 82872722 ~ 82873724 (-)
LOC118937424 NA coding downstream 623497 82868101 ~ 82871020 (-)
LOC118937426 LOC100380868 coding upstream 189815 83692703 ~ 83698034 (-)
ypel1 ypel1 coding upstream 371069 83873900 ~ 83903039 (-)
LOC110536511 NA coding upstream 409948 83914813 ~ 83921303 (-)
LOC110535142 mapk1 coding upstream 417743 83922608 ~ 83982640 (-)
grsf1 grsf1 coding upstream 540647 84045512 ~ 84084200 (-)
G1025444 NA non-coding downstream 23394 83470720 ~ 83471123 (-)
G1025415 NA non-coding downstream 110929 83383256 ~ 83383588 (-)
G1025412 NA non-coding downstream 125988 83367767 ~ 83368529 (-)
G1025406 NA non-coding downstream 136696 83357387 ~ 83357821 (-)
G1025362 NA non-coding downstream 228178 83265951 ~ 83266339 (-)
G1025460 NA non-coding upstream 5250 83510115 ~ 83511276 (-)
G1025461 NA non-coding upstream 15111 83519976 ~ 83521180 (-)
G1025465 NA non-coding upstream 35777 83540642 ~ 83542556 (-)
G1025467 NA non-coding upstream 39432 83544297 ~ 83626790 (-)
G1025477 NA non-coding upstream 50656 83555521 ~ 83557131 (-)
LOC110536484 LOC106570928 other downstream 1235552 82257489 ~ 82522382 (-)
G1023858 NA other downstream 1580150 81912957 ~ 81914367 (-)
G1023618 NA other downstream 1877288 81615253 ~ 81617939 (-)
G1023156 NA other downstream 2353938 81139984 ~ 81140579 (-)
G1023036 NA other downstream 2596514 80893902 ~ 80898003 (-)
G1025481 NA other upstream 57437 83562302 ~ 83565574 (-)
G1025498 NA other upstream 210818 83683265 ~ 83718776 (-)
G1026586 NA other upstream 1682461 85187326 ~ 85197500 (-)

Expression


Co-expression Network