G1026460



Basic Information


Item Value
gene id G1026460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 85050354 ~ 85056513 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1168282
tctgtctctgtggtcctgactgaggatctgtttctgtgttctctgtagtcctgactgaggatgtgtttctgtctctgtggttctgattgaggatgtgttctctgtagtcctgactgagaatgtgtttatgtctctgtggttctgattgaggatgtgttctctgtagtcctgactgaggatgtgtttctgtgttctctgcagtcctgactgaggatgtgtttctgtctctgtagtcctgactgaggatgtgtttctgtcaatGTAGTGTtgcgttccccagtttatgtgttgtagtttgtgtacttgcatgtgtttatttcaggaaatggcttcctgaaatcctcaagcagctgattggtcgactccagggctaattggagagctgaccccgccccctcgtcaagacacagctgtctccagttacattcattctgaagctatataaaagccagtgttctgttcagctgagagattttggaggtagggattgctgagagattttgctagagagattttggaggtagggattgctgagagattttgctagagagattttggaggtagggattgctgagagagattttgctagagagattttgct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1168282 True 601 lncRNA 0.45 2 85050354 85056513

Neighbor


gene id symbol gene type direction distance location
dmrt2a LOC106570979 coding downstream 84587 84961291 ~ 84965767 (-)
smarca2 NA coding downstream 330548 84501885 ~ 84719806 (-)
adamts3 LOC107719190 coding downstream 624202 84235293 ~ 84426152 (-)
grsf1 grsf1 coding downstream 966154 84045512 ~ 84084200 (-)
LOC110535142 mapk1 coding downstream 1067714 83922608 ~ 83982640 (-)
kank1a kank1 coding upstream 183096 85239609 ~ 85392002 (-)
dapk1 dapk1 coding upstream 395672 85452185 ~ 85658741 (-)
LOC118937430 NA coding upstream 464066 85520579 ~ 85522516 (-)
tmem8b tmem8b coding upstream 985229 86041742 ~ 86232638 (-)
G1026447 NA non-coding downstream 10251 85039863 ~ 85040103 (-)
G1026435 NA non-coding downstream 21127 85028843 ~ 85029227 (-)
G1026434 NA non-coding downstream 22145 85027857 ~ 85028209 (-)
G1026429 NA non-coding downstream 24495 85025621 ~ 85025859 (-)
G1026428 NA non-coding downstream 24913 85025074 ~ 85025441 (-)
G1026466 NA non-coding upstream 3471 85059984 ~ 85060569 (-)
G1026472 NA non-coding upstream 16248 85072761 ~ 85073064 (-)
G1026534 NA non-coding upstream 85277 85141790 ~ 85141989 (-)
G1026542 NA non-coding upstream 95866 85152379 ~ 85153018 (-)
G1026552 NA non-coding upstream 103118 85159631 ~ 85159839 (-)
ypel1 ypel1 other downstream 1147315 83873900 ~ 83903039 (-)
G1025498 NA other downstream 1331746 83683265 ~ 83718776 (-)
G1025467 NA other downstream 1423564 83544297 ~ 83626790 (-)
G1025481 NA other downstream 1484780 83562302 ~ 83565574 (-)
LOC110536484 LOC106570928 other downstream 2791389 82257489 ~ 82522382 (-)
G1026586 NA other upstream 130813 85187326 ~ 85197500 (-)
G1026978 NA other upstream 556839 85613352 ~ 85614375 (-)

Expression



Co-expression Network