Gene
RNA
| Item | Value |
|---|---|
| gene id | G1026584 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 85184667 ~ 85198303 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: bromodomain-containing protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1168439 | True | 538 | lncRNA | 0.42 | 2 | 85184667 | 85198303 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937429 | dmrt3 | coding | downstream | 62295 | 85046114 ~ 85122372 (-) |
| dmrt2a | LOC106570979 | coding | downstream | 218900 | 84961291 ~ 84965767 (-) |
| smarca2 | NA | coding | downstream | 464861 | 84501885 ~ 84719806 (-) |
| adamts3 | LOC107719190 | coding | downstream | 758515 | 84235293 ~ 84426152 (-) |
| grsf1 | grsf1 | coding | downstream | 1100467 | 84045512 ~ 84084200 (-) |
| kank1a | kank1 | coding | upstream | 41306 | 85239609 ~ 85392002 (-) |
| dapk1 | dapk1 | coding | upstream | 253882 | 85452185 ~ 85658741 (-) |
| LOC118937430 | NA | coding | upstream | 322276 | 85520579 ~ 85522516 (-) |
| tmem8b | tmem8b | coding | upstream | 843439 | 86041742 ~ 86232638 (-) |
| G1026583 | NA | non-coding | downstream | 1250 | 85179466 ~ 85183417 (-) |
| G1026574 | NA | non-coding | downstream | 8368 | 85176045 ~ 85176299 (-) |
| G1026569 | NA | non-coding | downstream | 15797 | 85168551 ~ 85168870 (-) |
| G1026562 | NA | non-coding | downstream | 20890 | 85163569 ~ 85163777 (-) |
| G1026558 | NA | non-coding | downstream | 22774 | 85161692 ~ 85161893 (-) |
| G1026750 | NA | non-coding | upstream | 70978 | 85269281 ~ 85271181 (-) |
| G1026754 | NA | non-coding | upstream | 96980 | 85295283 ~ 85295674 (-) |
| G1026759 | NA | non-coding | upstream | 120674 | 85318977 ~ 85320079 (-) |
| G1026765 | NA | non-coding | upstream | 135640 | 85333943 ~ 85334312 (-) |
| ypel1 | ypel1 | other | downstream | 1281628 | 83873900 ~ 83903039 (-) |
| G1025498 | NA | other | downstream | 1466059 | 83683265 ~ 83718776 (-) |
| G1025467 | NA | other | downstream | 1557877 | 83544297 ~ 83626790 (-) |
| G1025481 | NA | other | downstream | 1619093 | 83562302 ~ 83565574 (-) |
| LOC110536484 | LOC106570928 | other | downstream | 2925702 | 82257489 ~ 82522382 (-) |
| G1026978 | NA | other | upstream | 415049 | 85613352 ~ 85614375 (-) |
