G1027439


Basic Information

Item Value
gene id G1027439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 86196866 ~ 86199070 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1169552
tgtgggaagaaatgtgttttttttgtcaattgTAACCGcatacttgttgtttgtgtacatggattttataatgttgtatgtttttcctccaacacctctttccatcaatttgtatagcagaccttCATGctaaattgagtcaaaagcttttttgaaatcaacaaacgATGAGAGGACTTTGCCTTTCTTTTGGTTTGTTTCTTTGTCAATTATGGTCTGCTGGGTGAATACGTGATCTGTTGTAATTTGGTAAAAAcccaatttgacatttgttcagtACATTGTACATTCAGtacactgaggaaatgtacaagtctgctgttaatgataatgcagaggattttcccaaggttgcttatgacgcatatcccacagtagttattgtGGTCAAATTTCTCTCCACtgttgtggattggggtgatcagccCTCGGTTCCAGAAGGTTCCAGAAGATGAGGATGATGTAATGGTGATCAGCCCTCGGTTCCAGAAGGTTCCAGAAGATGAGGATGATGTAATGGTGATCAGCCCTCGGTTCCAGATgagctgaggatgatgtaatGGTGATCAGCCCTCGGTTCCAGAAGATGAGGATGATGTAATGGTGATCAGCCCTCGGTTCCAGAAGGTTCCAGATGAACTGAGGATGATGTAATGGTGATCAGCCCTCGGTTCCAGAAGGTTCCAGATGAACTGAGGATGATGTAATGGTGATCAGCCCTCGGTTCCAGAAGGTTCCAGATGATCTGAGGATGATGTAATGGTGATCAGCCCTCGGTTCCAGAAGGTTCCAGATGAACTGAGGATGATGTAATGTTGATCAGCCCTCGGTTCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1169552 True 836 lncRNA 0.43 3 86196866 86199070

Neighbor

gene id symbol gene type direction distance location
dapk1 dapk1 coding downstream 538125 85452185 ~ 85658741 (-)
LOC118937430 NA coding downstream 674350 85520579 ~ 85522516 (-)
kank1a kank1 coding downstream 804864 85239609 ~ 85392002 (-)
LOC118937429 dmrt3 coding downstream 1074494 85046114 ~ 85122372 (-)
dmrt2a LOC106570979 coding downstream 1231099 84961291 ~ 84965767 (-)
G1027434 NA non-coding downstream 10481 86184507 ~ 86186385 (-)
G1027402 NA non-coding downstream 10732 86138513 ~ 86186134 (-)
G1027332 NA non-coding downstream 126771 86018596 ~ 86070095 (-)
tmem8b tmem8b non-coding downstream 153421 86041742 ~ 86232638 (-)
G1027220 NA non-coding downstream 178603 86017968 ~ 86018263 (-)
G1027445 NA non-coding upstream 13546 86212616 ~ 86213229 (-)
G1027446 NA non-coding upstream 31612 86230682 ~ 86230985 (-)
G1027448 NA non-coding upstream 34942 86234012 ~ 86234353 (-)
G1027451 NA non-coding upstream 38696 86237766 ~ 86237965 (-)
G1027452 NA non-coding upstream 40559 86239629 ~ 86239909 (-)
G1026978 NA other downstream 582491 85613352 ~ 85614375 (-)
G1026586 NA other downstream 999366 85187326 ~ 85197500 (-)
ypel1 ypel1 other downstream 2293827 83873900 ~ 83903039 (-)
G1025498 NA other downstream 2478258 83683265 ~ 83718776 (-)
G1025467 NA other downstream 2570076 83544297 ~ 83626790 (-)

Expression


Co-expression Network