G1027462



Basic Information


Item Value
gene id G1027462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 86251988 ~ 86252366 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1169579
ACCCTATATACAtcgacatggaatcactggtcactttaataatggaatcactagtcactttaataatggaacactggtcactttaataatggaacactggtcactttaataatggaacactggtccctttaataatggaacactggtccctttaataatggaacactggtccctttaataatggaacactggtccctttaataatggaacactggtccctttaataatggaacactggtcactttaataatggaacactggtcactttaataatggaacactggtccctttaataatggaacactggtcactttaataatggaacactggtcactttaataatggaacactggtcactttaataatggaacactggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1169579 True 379 lncRNA 0.37 1 86251988 86252366

Neighbor


gene id symbol gene type direction distance location
tmem8b tmem8b coding downstream 19350 86041742 ~ 86232638 (-)
dapk1 dapk1 coding downstream 593247 85452185 ~ 85658741 (-)
LOC118937430 NA coding downstream 729472 85520579 ~ 85522516 (-)
kank1a kank1 coding downstream 859986 85239609 ~ 85392002 (-)
LOC118937429 dmrt3 coding downstream 1129616 85046114 ~ 85122372 (-)
G1027453 NA non-coding downstream 11621 86239978 ~ 86240367 (-)
G1027452 NA non-coding downstream 12079 86239629 ~ 86239909 (-)
G1027451 NA non-coding downstream 14023 86237766 ~ 86237965 (-)
G1027448 NA non-coding downstream 17635 86234012 ~ 86234353 (-)
G1027446 NA non-coding downstream 21003 86230682 ~ 86230985 (-)
G1027465 NA non-coding upstream 3625 86255991 ~ 86256434 (-)
G1027467 NA non-coding upstream 6048 86258414 ~ 86258653 (-)
G1026978 NA other downstream 637613 85613352 ~ 85614375 (-)
G1026586 NA other downstream 1054488 85187326 ~ 85197500 (-)
ypel1 ypel1 other downstream 2348949 83873900 ~ 83903039 (-)
G1025498 NA other downstream 2533380 83683265 ~ 83718776 (-)
G1025467 NA other downstream 2625198 83544297 ~ 83626790 (-)

Expression



Co-expression Network