si:dkey-110g7.8 (LOC106600891)


Basic Information

Item Value
gene id si:dkey-110g7.8
gene name LOC106600891
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 64369958 ~ 64376356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624541.2
TCCCTGAAGCTGCATGGTGTTAACTTCCTGTCTGCACAATATTCGCTCTTGAGAAGATAAATAAAAAAAGGGGGGAAAATGAGTTCCAGGGAAAAGGGGGCAAGACAGAAAGACCtacagagagaaatggagaaagaaaATGGTagaatgagaggaagagagagaaggagtgacaaagagagaaaggggaaacagagagcgagagagagcgagagagagggggcggggtAGGATAGAGTGAAATGTTCTGCGATTGAAGGAGAGTGagcatgagagggagagagactagaAGACTAAACCTTTTTGACTGCCAGTATTTTGTGGACCGGTCAGGATACACCATTGAACAGATTACCGGTGTCCCCTGAAGGAGCAGGAGGCAAAAAGCATGGAGGTGGAGGGGTGAGTAAGAAAACAAGAGGCTTGAGACAAAATGGCTACAGTCTCCACTGGTTCTGAATTTGGTACCGGTAGGTGAGTTTACTTCTGGAGCTCTGCTCCTCTATGTTTTGCTACAGATATTTATCTGCACTCTTCCATGGACAATCTCAACAGCAGCTACTGTCAGTTATAGCTCTCTCTTCTCTGGCCATCTGACAGCATAGACATTAAAACAGGACAATATTTATCACTCACTACCTTCCTGCCTTGGAGAGCTCAAATGGAGAGTCCAAACATCTGCCAGTCGTTGTCGTCTCCGACAGTTGAACCCATCTGTCATCTCCCGGAGCGTAGGCTTCTGTTGCTGGGGGGACCAGGAGCTGGGAAGAGCACCACAGGGAATGCCATCCTAGGTGAGGAGGTCTTCCAGACTGGGACAGAGACTGTCCACAGCACCGTTGGCCACGGGGGGGTCTGCAGGAGGCGTATCACTGTGGTTGACACCCCAGGCTGGATTATACCCCATGACTCAGCGGATGATAACACAGGGGCCCCGCCAGAGCGGGCTAGCAAGGAGGGACCCTGTGTCGGTGCCACCCTCTGTCCCCCAGGGCCCCACGCGCTCCTGCTGGTGGTCCCCGTGTCACAGCCCTTCACAGAGGGCCACAGGAAGGCAGCAGAGAAGCAGCTGGGTCATCTAGGAGGTGGGGCCTGGAGGTCCACCATGGTGCTCTTCACTGGGGTCGACAAGCTACCGGAGGGGACGTTCGTAGAGGAGTTCATTGCAGCTGGGGAGCCCCTTCAGTGGCTGGTGGAGAGGTGTGGTAACAGATACCATGGCCTGGATAGTAACCCACAGCAGAGTGGGGATGACAACACGGTGAACACACAAGTTCAGGAGCTGCTGGAGAAGGTAGAGGAGCAGGTTAAGGAAAACCATGGCTGGTATTTTGCAGTAAACGAACTGATTCTGCTAGAGGAGGAACAGGCAAGGAAGGCGGTGGAAGAGAGGCGGGTGAGAGAGGAgcgggaggaaagggagaggcagagacTGCGGATGGTCGGAGGGCCTCCCAGAGAGCTGAGGGTCCTCTTGTTGGGCTGGAAAGGAGTGGGAAAAAGTTCTGTAGGGAACACCATCCTGGGCCGGCGGGACTTTGAGTCTGGAACAGAGACGGAGCAGAGCCTTAGGAGGCAGGCTGAGGTGGCCGGACGCAGGGTCACTATCGTTGACACCCCTGGCTGGGACTGGTTCTCCGTCAGACGTACCCCGAAACACGTGAGACAGGAGTCGAAGCGAGGTGCCACCCTCCTCCGGCCTGGCCCCCACACCCTTCTCCTGGTGCTGCCAATCATCTCCACCCTCACTTCACGCAAGAGGCGGACCCTGGAGGCCCACCTGGAGGGCCTGTTTGGTGATAGGGCGTGTCTCCACACCATGGTGCTGTTCAGCTGCGGGGATTGGCTAGGCCGAACGCCCGTCGAGGAGCACATTCAGAAGGGAGGGCGGGAGCTCCACAGGTTGTTGGAATACTGTGGGAACTATTATCACGTGGTGGACAGCAAGATGCCGGGGAAGGACACAAGGAACATCTCAGATCTGCTGGACAAAATAGAGGAAATGATCAGAGAGAATGGTGATGAGGCCTTCTTGCCAATACAGATGGATGAAGAAAGCCCTGAGTCATCTGAGAACAACAGCCCTGAAGAGGACTGTAGCAGAGGATGCCAGCTCCAGTAGTGACAAGGGAGAGAGTAGCCAAGAGCACATGCTTACACACTGTAAGGTGGACATGCTCTCACACTCCAAGCCAAAACATTCACATTTCAAAGTGGCCTGGTGTATAATTACACtggaaatgaaatgaaataacacatacaatgccttcagaaagtattcacaccccttgactttttcaatggaaaaagtcaaggcgtctgaatacattctgaagggaCTGAACATGTATTCAAAGTAGTTGGGTCATTCTTGAATTGCTGTGGCATTTGCGTCCCTCGCCTTTGCAACCATGAAGAACACTTTAAAAGGACAAATAATTGCACATCATTCATGTTCTTGTTTATATTGAACTGTTTATCAATGATACAACATAATGCAAGTCCTTTATACTGCAAAACTGtatgcagtacttaatgcaagCACATTGTAGTGAGATATTTTGGGCATTAAGAGATATCTATCTACCATTTTGAATGCTAGAAAGTAACACAATATTGTATAGTTCAATGAAAACAAATAAAGTATATTTAAAAGAAGGCAAATGTATATAATAAAAATATCTATTTaccaaaaaatatatgggggattggaaattatgcttagaattacattgatagaagtcACAATctctctgcaatattaaagctgatctcaTTACTCATTACAAAGATatacaaggcaacagtaaacatgtcgtcCCCCACGAATGATGCAGCCTTGAGCCAATTAATAACAACAATTCAAACAAGGGTGACACTTTATTTGAAGGTACACATATGAGCCACTCATTTCTAGATTATAAGTATGTATATAAGTAGCTTATAAGGCCTTTATTATGTGTTATTAGCCATTTATTAGGCCTTCATTAAGTTTATTTGTTATTCAAACATTATAATGCATGTAATAATAACCTCATTATTAGCTATAATAAAGTCATATTTATTGTTAGTAAATATCAAGTAACACAAGAAACTATCTCAAGCTGGGACTAATAAGGGGCATAGCACCTCAATACTTGTTCCCTATTCTGAAGTGTGACTATATTTTTACTTGCTGATTTTTCCCCCCTATTAATGACCTCATTGGACAGAAAGGGGCACACCTCCCTCATATATACCATACAGCCAACATTCAAGATACATTTTTATGTAATCAATTAGCAACTAAACGTCTATATATACTTCCATCCATGTTGGCTATTTGGCATATAATGTGGCAtatttactatgactgtgatatgggGTTGCCTCACCTGATGTGGTTGCCTCTATTGAAATGTAAATGAAGGGCAAATATATTGTGAGCAAAATTATTCATCATGTCACTTTAGTCAATTATTTTTAAAGGGTTAAAGACGTAATATTTGACCTTCTATTGCCTCCATTTAAGAAAATCCTAGTTTACCTAAAATGTGTCATTAGTGTTACCATCATTGGTGTTACCATCATTGGTGTTATTACTCCTACTGTGGCACAATTCTATCATAACGGTAGAAATGATTTAAAGTCATTAAGCTGCCCTTTTAGTTGATTTGAAATGGGAAAATgtacccaaatacatttaaatatttAAAATCTAGAGAATGGACGTTTCCAAAAATGCCACTGCAATTCAAGAACGACCCAGTTGTCATTGTTTCCCTCAAGGTGTTATGGTAATTGAAAATGCAACTACGCATTATGAATACATTGTCTTATAAATGCATGTTGTGGTGAGCATCCTAAAGATAAACGGCACTCTTAAAATAATCACATCAATCTTATCATTTTATCAGGCTTTGGTTTGTGTCGTCAGAACAAACCAAACTAAATTGGAATGTAGTAATGGATGTTCTGTAACAGCACTGCCGTGTATTATTGAAATCTAACATTAACTTTGTATTTTAAATATCGCAACTCTGACACGTATAAATGCTTTACTGACTGTTTTATCTAGTAGTGCATTGCAGTACACATATTAAAAAATACATGCACATGATGTTATGTGAATGTTCAATTGCACTGAAATCCGTGAAAACATGTACATTAAAGCATTTTGCactgca
>TU1250127
agcgagagagagcgagagagagggggcggggtAGGATAGAGTGAAATGTTCTGCGATTGAAGGAGAGTGagcatgagagggagagagactagaAGACTAAACCTTTTTGACTGCCAGTATTTTGTGGACCGGTCAGGATACACCATTGAACAGATTACCGGTGTCCCCTGAAGGAGCAGGAGGCAAAAAGCATGGAGGTGGAGGGAGCTGAGGGTCCTCTTGTTGGGCTGGAAAGGAGTGGGAAAAAGTTCTGTAGGGAACACCATCCTGGGCCGGCGGGACTTTGAGTCTGGAACAGAGACGGAGCAGAGCCTTAGGAGGCAGGCTGAGGTGGCCGGACGCAGGGTCACTATCGTTGACACCCCTGGCTGGGACTGGTTCTCCGTCAGACGTACCCCGAAACACGTGAGACAGGAGTCGAAGCGAGGTGCCACCCTCCTCCGGCCTGGCCCCCACACCCTTCTCCTGGTGCTGCCAATCATCTCCACCCTCACTTCACGCAAGAGGCGGACCCTGGAGGCCCACCTGGAGGGCCTGTTTGGTGATAGGGCGTGTCTCCACACCATGGTGCTGTTCAGCTGCGGGGATTGGCTAGGCCGAACGCCCGTCGAGGAGCACATTCAGAAGGGAGGGCGGGAGCTCCACAGGTTGTTGGAATACTGTGGGAACTATTATCACGTGGTGGACAGCAAGATGCCGGGGAAGGACACAAGGAACATCTCAGATCTGCTGGACAAAATAGAGGAAATGATCAGAGAGAATGGTGATGAGGCCTTCTTGCCAATACAGATGGATGAAGAAAGCCCTGAGTCATCTGAGAACAACAGCCCTGAAGAGGACTGTAGCAGAGGATGCCAGCTCCAGTAGTGACAAGGGAGAGAGTAGCCAAGAGCACATGCTTACACACTGTAAGGTGGACATGCTCTCACACTCCAAGCCAAAACATTCACATTTCAAAGTGGCCTGGTGTATAATTACACtggaaatgaaatgaaataacacatacaatgccttcagaaagtattcacaccccttgactttttcaatggaaaaagtcaaggcgtctgaatacattctgaagggaCTGAACATGTATTCAAAGTAGTTGGGTCATTCTTGAATTGCTGTGGCATTTGCGTCCCTCGCCTTTGCAACCATGAAGAACACTTTAAAAGGACAAATAATTGCACATCATTCATGTTCTTGTTTATATTGAACTGTTTATCAATGATACAACATAATGCAAGTCCTTTATACTGCAAAACTGtatgcagtacttaatgcaagCACATTGTAGTGAGATATTTTGGGCATTAAGAGATATCTATCTACCATTTTGAATGCTAGAAAGTAACACAATATTGTATAGTTCAATGAAAACAAATAAAGTATATTTAAAAGAAGGCAAATGTATATAATAAAAATATCTATTTaccaaaaaatatatgggggattggaaattatgcttagaattacattgatagaagtcACAATctctctgcaatattaaagctgatctcaTTACTCATTACAAAGATatacaaggcaacagtaaacatgtcgtcCCCCACGAATGATGCAGCCTTGAGCCAATTAATAACAACAATTCAAACAAGGGTGACACTTTATTTGAAGGTACACATATGAGCCACTCATTTCTAGATTATAAGTATGTATATAAGTAGCTTATAAGGCCTTTATTATGTGTTATTAGCCATTTATTAGGCCTTCATTAAGTTTATTTGTTATTCAAACATTATAATGCATGTAATAATAACCTCATTATTAGCTATAATAAAGTCATATTTATTGTTAGTAAATATCAAGTAACACAAGAAACTATCTCAAGCTGGGACTAATAAGGGGCATAGCACCTCAATACTTGTTCCCTATTCTGAAGTGTGACTATATTTTTACTTGCTGATTTTTCCCCCCTATTAATGACCTCATTGGACAGAAAGGGGCACACCTCCCTCATATATACCATACAGCCAACATTCAAGATACATTTTTATGTAATCAATTAGCAACTAAACGTCTATATATACTTCCATCCATGTTGGCTATTTGGCATATAATGTGGCAtatttactatgactgtgatatgggGTTGCCTCACCTGATGTGGTTGCCTCTATTGAAATGTAAATGAAGGGCAAATATATTGTGAGCAAAATTATTCATCATGTCACTTTAGTCAATTATTTTTAAAGGGTTAAAGACGTAATATTTGACCTTCTATTGCCTCCATTTAAGAAAATCCTAGTTTACCTAAAATGTGTCATTAGTGTTACCATCATTGGTGTTACCATCATTGGTGTTATTACTCCTACTGTGGCACAATTCTATCATAACGGTAGAAATGATTTAAAGTCATTAAGCTGCCCTTTTAGTTGATTTGAAATGGGAAAATgtacccaaatacatttaaatatttAAAATCTAGAGAATGGACGTTTCCAAAAATGCCACTGCAATTCAAGAACGACCCAGTTGTCATTGTTTCCCTCAAGGTGTTATGGTAATTGAAAATGCAACTACGCATTATGAATACATTGTCTTATAAATGCATGTTGTGGTGAGCATCCTAAAGATAAACGGCACTCTTAAAATAATCACATCAATCTTATCATTTTATCAGGCTTTGGTTTGTGTCGTCAGAACAAACCAAACTAAATTGGAATGTAGTAATGGATGTTCTGTAACAGCACTGCCGTGTATTATTGAAATCTAACATTAACTTTGTATTTTAAATATCGCAACTCTGAC
>TU1250128
agcgagagagagcgagagagagggggcggggtAGGATAGAGTGAAATGTTCTGCGATTGAAGGAGAGTGagcatgagagggagagagactagaAGACTAAACCTTTTTGACTGCCAGTATTTTGTGGACCGGTCAGGATACACCATTGAACAGATTACCGGTGTCCCCTGAAGGAGCAGGAGGCAAAAAGCATGGAGGTGGAGGGAGCTGAGGGTCCTCTTGTTGGGCTGGAAAGGAGTGGGAAAAAGTTCTGTAGGGAACACCATCCTGGGCCGGCGGGACTTTGAGTCTGGAACAGAGACGGAGCAGAGCCTTAGGAGGCAGGCTGAGGTGGCCGGACGCAGGGTCACTATCGTTGACACCCCTGGCTGGGACTGGTTCTCCGTCAGACGTACCCCGAAACACGTGAGACAGGAGTCGAAGCGAGGTGCCACCCTCCTCCGGCCTGGCCCCCACACCCTTCTCCTGGTGCTGCCAATCATCTCCACCCTCACTTCACGCAAGAGGCGGACCCTGGAGGCCCACCTGGAGGGCCTGTTTGGTGATAGGGCGTGTCTCCACACCATGGTGCTGTTCAGCTGCGGGGATTGGCTAGGCCGAACGCCCGTCGAGGAGCACATTCAGAAGGGAGGGCGGGAGCTCCACAGGTTGTTGGAATACTGTGGGAACTATTATCACGTGGTGGACAGCAAGATGCCGGGGAAGGACACAAGGAACATCTCAGATCTGCTGGACAAAATAGAGGAAATGATCAGAGAGAATGGTGATGAGGCCTTCTTGCCAATACAGATGGATGAAGAAAGCCCTGAGTCATCTGAGAACAACAGCCCTGAAGAGGACTGTAGCAGAGGATGCCAGCTCCAGTAGTGACAAGGGAGAGAGTAGCCAAGAGCACATGCTTACACACTGTAAGGTGGACATGCTCTCACACTCCAAGCCAAAACATTCACATTTCAAAGTGGCCTGGTGTATAATTACACtggaaatgaaatgaaataacacatacaatgccttcagaaagtattcacaccccttgactttttctgaatacattctgaagggaCTGAACATGTATTCAAAGTAGTTGGGTCATTCTTGAATTGCTGTGGCATTTGCGTCCCTCGCCTTTGCAACCATGAAGAACACTTTAAAAGGACAAATAATTGCACATCATTCATGTTCTTGTTTATATTGAACTGTTTATCAATGATACAACATAATGCAAGTCCTTTATACTGCAAAACTGtatgcagtacttaatgcaagCACATTGTAGTGAGATATTTTGGGCATTAAGAGATATCTATCTACCATTTTGAATGCTAGAAAGTAACACAATATTGTATAGTTCAATGAAAACAAATAAAGTATATTTAAAAGAAGGCAAATGTATATAATAAAAATATCTATTTaccaaaaaatatatgggggattggaaattatgcttagaattacattgatagaagtcACAATctctctgcaatattaaagctgatctcaTTACTCATTACAAAGATatacaaggcaacagtaaacatgtcgtcCCCCACGAATGATGCAGCCTTGAGCCAATTAATAACAACAATTCAAACAAGGGTGACACTTTATTTGAAGGTACACATATGAGCCACTCATTTCTAGATTATAAGTATGTATATAAGTAGCTTATAAGGCCTTTATTATGTGTTATTAGCCATTTATTAGGCCTTCATTAAGTTTATTTGTTATTCAAACATTATAATGCATGTAATAATAACCTCATTATTAGCTATAATAAAGTCATATTTATTGTTAGTAAATATCAAGTAACACAAGAAACTATCTCAAGCTGGGACTAATAAGGGGCATAGCACCTCAATACTTGTTCCCTATTCTGAAGTGTGACTATATTTTTACTTGCTGATTTTTCCCCCCTATTAATGACCTCATTGGACAGAAAGGGGCACACCTCCCTCATATATACCATACAGCCAACATTCAAGATACATTTTTATGTAATCAATTAGCAACTAAACGTCTATATATACTTCCATCCATGTTGGCTATTTGGCATATAATGTGGCAtatttactatgactgtgatatgggGTTGCCTCACCTGATGTGGTTGCCTCTATTGAAATGTAAATGAAGGGCAAATATATTGTGAGCAAAATTATTCATCATGTCACTTTAGTCAATTATTTTTAAAGGGTTAAAGACGTAATATTTGACCTTCTATTGCCTCCATTTAAGAAAATCCTAGTTTACCTAAAATGTGTCATTAGTGTTACCATCATTGGTGTTACCATCATTGGTGTTATTACTCCTACTGTGGCACAATTCTATCATAACGGTAGAAATGATTTAAAGTCATTAAGCTGCCCTTTTAGTTGATTTGAAATGGGAAAATgtacccaaatacatttaaatatttAAAATCTAGAGAATGGACGTTTCCAAAAATGCCACTGCAATTCAAGAACGACCCAGTTGTCATTGTTTCCCTCAAGGTGTTATGGTAATTGAAAATGCAACTACGCATTATGAATACATTGTCTTATAAATGCATGTTGTGGTGAGCATCCTAAAGATAAACGGCACTCTTAAAATAATCACATCAATCTTATCATTTTATCAGGCTTTGGTTTGTGTCGTCAGAACAAACCAAACTAAATTGGAATGTAGTAATGGATGTTCTGTAACAGCACTGCCGTGTATTATTGAAATCTAACATTAACTTTGTATTTTAAATATCGCAACTCTGAC

Function

NR:

description
GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624541.2 False 4166 mRNA 0.44 3 64369958 64376356
TU1250127 False 2769 TUCP 0.41 3 64370155 64376214
TU1250128 True 2748 TUCP 0.41 4 64370155 64376214

Neighbor

gene id symbol gene type direction distance location
LOC110538012 LOC106600897 coding upstream 127005 64232139 ~ 64242953 (+)
baiap2l2a LOC106600898 coding upstream 197780 64142855 ~ 64172178 (+)
LOC110538933 LOC106600901 coding upstream 461285 63888086 ~ 63908673 (+)
trnas-uga-37 NA coding upstream 491271 63878606 ~ 63878687 (+)
trnas-uga-36 NA coding upstream 491893 63877984 ~ 63878065 (+)
LOC110538020 LOC106600890 coding downstream 31017 64407373 ~ 64416073 (+)
LOC110538022 LOC106600886 coding downstream 54149 64430505 ~ 64438581 (+)
LOC110538024 LOC106600885 coding downstream 67404 64443760 ~ 64445157 (+)
LOC110538023 LOC106600884 coding downstream 82941 64459297 ~ 64461117 (+)
LOC110538025 LOC105029658 coding downstream 93760 64470116 ~ 64475411 (+)
G1099187 LOC106600892 non-coding upstream 10096 64349651 ~ 64359862 (+)
G1099213 NA non-coding upstream 32486 64337217 ~ 64337472 (+)
G1099203 NA non-coding upstream 45733 64324006 ~ 64324225 (+)
G1099197 NA non-coding upstream 55557 64314166 ~ 64314401 (+)
G1097128 NA non-coding upstream 102705 64266815 ~ 64267253 (+)
G1099241 NA non-coding downstream 1955 64378311 ~ 64378511 (+)
G1099258 LOC106600887 non-coding downstream 49289 64425645 ~ 64426722 (+)
G1099280 LOC105030512 non-coding downstream 86038 64462394 ~ 64462760 (+)
G1099325 LOC106600973 non-coding downstream 168152 64544508 ~ 64548249 (+)
G1099336 NA non-coding downstream 184293 64560649 ~ 64566188 (+)
G1097122 NA other upstream 114894 64254612 ~ 64255064 (+)
G1097116 NA other upstream 141274 64228001 ~ 64228684 (+)
G1097063 NA other upstream 233254 64136358 ~ 64136704 (+)
LOC100305204 hebp2 other upstream 1035264 63302491 ~ 63334694 (+)
G1100432 NA other downstream 1056784 65433140 ~ 65433457 (+)
LOC110538063 abi1 other downstream 1772853 66148710 ~ 66168256 (+)
LOC110538072 psd3 other downstream 2285608 66661875 ~ 66670815 (+)
G1101805 NA other downstream 2348305 66724661 ~ 66822261 (+)
G1102021 NA other downstream 2682379 67058735 ~ 67059407 (+)

Expression


Co-expression Network