Gene
RNA
| Item | Value |
|---|---|
| gene id | gh1 |
| gene name | gh1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 65517229 ~ 65521363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| gh1 | Enables growth hormone activity and growth hormone receptor binding activity. Acts upstream of or within adipose tissue development and positive regulation of lipid catabolic process. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including adenohypophyseal placode; female organism; hematopoietic multipotent progenitor cell; hypophysis; and male organism. Human ortholog(s) of this gene implicated in several diseases, including anemia (multiple); autoimmune disease of endocrine system (multiple); diabetic retinopathy; isolated growth hormone deficiency (multiple); and progeria. Orthologous to several human genes including GH1 (growth hormone 1). |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0005179 | hormone activity | molecular_function |
| id | description |
|---|---|
| K05438 | GH; growth hormone |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001124689.1 | True | 1178 | mRNA | 0.46 | 6 | 65517229 | 65521363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| scn4ab | LOC106600868 | coding | upstream | 20420 | 65460530 ~ 65496809 (+) |
| kansl1b | LOC106600871 | coding | upstream | 147521 | 65287663 ~ 65369708 (+) |
| cdc27 | LOC106600875 | coding | upstream | 233303 | 65250454 ~ 65283926 (+) |
| crhr1 | LOC106600876 | coding | upstream | 399850 | 64951031 ~ 65117379 (+) |
| c1qtnf6a | c1qtnf6 | coding | upstream | 979830 | 64522838 ~ 64537399 (+) |
| rdm1 | rdm1 | coding | downstream | 5209 | 65526572 ~ 65534174 (+) |
| ifn3 | ifn3 | coding | downstream | 126572 | 65647935 ~ 65649954 (+) |
| LOC118937709 | LOC106600970 | coding | downstream | 141369 | 65662732 ~ 65663781 (+) |
| LOC110538937 | LOC106600965 | coding | downstream | 147939 | 65669302 ~ 65670295 (+) |
| ifnphi1 | LOC106600969 | coding | downstream | 153637 | 65675000 ~ 65676578 (+) |
| G1100443 | NA | non-coding | upstream | 66660 | 65450229 ~ 65450569 (+) |
| G1100441 | NA | non-coding | upstream | 74089 | 65442899 ~ 65443140 (+) |
| G1100374 | LOC106612182 | non-coding | upstream | 251064 | 65265943 ~ 65266165 (+) |
| G1100368 | NA | non-coding | upstream | 261856 | 65255166 ~ 65255373 (+) |
| G1100472 | NA | non-coding | downstream | 3540 | 65524903 ~ 65532871 (+) |
| G1100800 | NA | non-coding | downstream | 54256 | 65575619 ~ 65597668 (+) |
| G1100821 | NA | non-coding | downstream | 88215 | 65609578 ~ 65617409 (+) |
| LOC110538052 | ifn1 | non-coding | downstream | 285560 | 65802490 ~ 65807617 (+) |
| G1101009 | NA | non-coding | downstream | 338457 | 65859820 ~ 65971064 (+) |
| G1100432 | NA | other | upstream | 83772 | 65433140 ~ 65433457 (+) |
| si:dkey-110g7.8 | LOC106600891 | other | upstream | 1141015 | 64369958 ~ 64376356 (+) |
| G1097122 | NA | other | upstream | 1262165 | 64254612 ~ 64255064 (+) |
| G1097116 | NA | other | upstream | 1288545 | 64228001 ~ 64228684 (+) |
| G1097063 | NA | other | upstream | 1380525 | 64136358 ~ 64136704 (+) |
| LOC110538063 | abi1 | other | downstream | 627846 | 66148710 ~ 66168256 (+) |
| LOC110538072 | psd3 | other | downstream | 1140601 | 66661875 ~ 66670815 (+) |
| G1101805 | NA | other | downstream | 1203298 | 66724661 ~ 66822261 (+) |
| G1102021 | NA | other | downstream | 1537372 | 67058735 ~ 67059407 (+) |
| G1102115 | NA | other | downstream | 1703989 | 67225352 ~ 67225799 (+) |
