G1036979


Basic Information

Item Value
gene id G1036979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 10531722 ~ 10586878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1181669
CGGGTTGTACTGTCAGTGACAGCCAGCACAGAGCCAGATACATCCACATACTTTCCCTGGGTTGTACTGTCAGTGACAGCCAGCACAGAGCCAGATACATCCACATACAGTACTTTCCCTGGGTTGTACTGTCAGTGACAGCCAGCACAGAGCCAGATACATCCACATACTTTCCCTGGGTTGTACTGTCAGTGACAGCCAGCACAGAGCCAGATACATCCACATACTTTCCCTGGGTTGTACTGTCAGTGACAGCCAGCACAGAGCCAGATACATCCACATACATTCCCTGGGGGCCATTTTGACGTGGAGTGGattggagtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1181669 True 478 lncRNA 0.50 2 10531722 10586878

Neighbor

gene id symbol gene type direction distance location
LOC110536943 LOC106568492 coding downstream 362047 10136018 ~ 10169675 (-)
LOC110536942 s1pr3 coding downstream 441590 10083932 ~ 10090132 (-)
zgc:86839 cks2 coding downstream 536207 9989254 ~ 9995515 (-)
sema4d sema4d coding downstream 547929 9901109 ~ 9983793 (-)
rad1 rad1 coding downstream 632101 9897028 ~ 9899621 (-)
dym LOC106568469 coding upstream 49742 10636620 ~ 10848489 (-)
LOC110536951 cr032 coding upstream 263293 10850171 ~ 10860150 (-)
LOC110536953 LOC106561351 coding upstream 371565 10958443 ~ 10961023 (-)
LOC110536954 LOC106568457 coding upstream 383062 10969940 ~ 10991575 (-)
LOC110536955 LOC106568458 coding upstream 459770 11046648 ~ 11051785 (-)
G1036959 NA non-coding downstream 62509 10465177 ~ 10469213 (-)
G1036958 NA non-coding downstream 66643 10464776 ~ 10465079 (-)
G1036946 NA non-coding downstream 106527 10424792 ~ 10425195 (-)
G1036934 NA non-coding downstream 121874 10407654 ~ 10409848 (-)
G1036921 NA non-coding downstream 156981 10374249 ~ 10374741 (-)
G1037013 NA non-coding upstream 18065 10604943 ~ 10605252 (-)
G1037037 NA non-coding upstream 71612 10658490 ~ 10659160 (-)
G1037058 NA non-coding upstream 127706 10714584 ~ 10715908 (-)
G1037087 NA non-coding upstream 213134 10800012 ~ 10800419 (-)
G1037113 NA non-coding upstream 268095 10854973 ~ 10855345 (-)
LOC110536932 NA other downstream 842680 9684834 ~ 9696461 (-)
G1035717 NA other downstream 983587 9533500 ~ 9548135 (-)
hcn1 hcn1 other downstream 1489042 9018507 ~ 9206417 (-)
G1035160 NA other downstream 1692888 8836256 ~ 8838834 (-)
G1037216 NA other upstream 516206 11103084 ~ 11103448 (-)
G1037217 NA other upstream 519057 11105935 ~ 11106320 (-)
LOC110536956 LOC106568459 other upstream 627073 11212672 ~ 11231102 (-)
G1038258 NA other upstream 1019473 11606351 ~ 11615943 (-)

Expression


Co-expression Network