Gene
RNA
| Item | Value |
|---|---|
| gene id | G1036986 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 10547294 ~ 10547737 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1181676 | False | 221 | lncRNA | 0.55 | 4 | 10547294 | 10547737 |
| TU1181677 | True | 316 | lncRNA | 0.54 | 2 | 10547294 | 10547737 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536943 | LOC106568492 | coding | downstream | 377619 | 10136018 ~ 10169675 (-) |
| LOC110536942 | s1pr3 | coding | downstream | 457162 | 10083932 ~ 10090132 (-) |
| zgc:86839 | cks2 | coding | downstream | 551779 | 9989254 ~ 9995515 (-) |
| sema4d | sema4d | coding | downstream | 563501 | 9901109 ~ 9983793 (-) |
| rad1 | rad1 | coding | downstream | 647673 | 9897028 ~ 9899621 (-) |
| smad7 | LOC106568470 | coding | upstream | 29067 | 10576804 ~ 10623185 (-) |
| dym | LOC106568469 | coding | upstream | 88883 | 10636620 ~ 10848489 (-) |
| LOC110536951 | cr032 | coding | upstream | 302434 | 10850171 ~ 10860150 (-) |
| LOC110536953 | LOC106561351 | coding | upstream | 410706 | 10958443 ~ 10961023 (-) |
| LOC110536954 | LOC106568457 | coding | upstream | 422203 | 10969940 ~ 10991575 (-) |
| G1036959 | NA | non-coding | downstream | 78081 | 10465177 ~ 10469213 (-) |
| G1036958 | NA | non-coding | downstream | 82215 | 10464776 ~ 10465079 (-) |
| G1036946 | NA | non-coding | downstream | 122099 | 10424792 ~ 10425195 (-) |
| G1036934 | NA | non-coding | downstream | 137446 | 10407654 ~ 10409848 (-) |
| G1036921 | NA | non-coding | downstream | 172553 | 10374249 ~ 10374741 (-) |
| G1036995 | NA | non-coding | upstream | 21625 | 10569362 ~ 10571729 (-) |
| G1037006 | NA | non-coding | upstream | 36069 | 10583806 ~ 10584110 (-) |
| G1037013 | NA | non-coding | upstream | 57206 | 10604943 ~ 10605252 (-) |
| G1037037 | NA | non-coding | upstream | 110753 | 10658490 ~ 10659160 (-) |
| G1037058 | NA | non-coding | upstream | 166847 | 10714584 ~ 10715908 (-) |
| LOC110536932 | NA | other | downstream | 858252 | 9684834 ~ 9696461 (-) |
| G1035717 | NA | other | downstream | 999159 | 9533500 ~ 9548135 (-) |
| hcn1 | hcn1 | other | downstream | 1504614 | 9018507 ~ 9206417 (-) |
| G1035160 | NA | other | downstream | 1708460 | 8836256 ~ 8838834 (-) |
| G1037216 | NA | other | upstream | 555347 | 11103084 ~ 11103448 (-) |
| G1037217 | NA | other | upstream | 558198 | 11105935 ~ 11106320 (-) |
| LOC110536956 | LOC106568459 | other | upstream | 666214 | 11212672 ~ 11231102 (-) |
| G1038258 | NA | other | upstream | 1058614 | 11606351 ~ 11615943 (-) |
