G1037417


Basic Information

Item Value
gene id G1037417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 11247457 ~ 11250029 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1182178
TCACCTCGACCCCCATTTAACCTCCTACTGTATGGGATAACACATTTAACTGACTCCCATTTAACTTCCTACTGTATGGTGTCACACATTTAACTGACCCCCCTTTAACCTCCTACTGTATGGGGTAACACATTCAGCTCACTGACCCCCATTTAATCCCTGACCCACCTTTAACCTCACTGCTACCATCCAGATCCTCATTTCCGTATCCTAAAAATCCCATTGTCTAGTGTTGTCGTTGTCACAGAGTTAAGAATGTGCCGTAAGGTCACtccacagctagcttgaaatgtTGTCGATGGAGCCATCCAATTGGATCCTTTTGTATAGCTCAATCGGCCGGTACGTTGTCAAGGAGGATGGTCGCTTGTTTGAGCCCGTTATGGGGACACGGACAGTGGAGGACGATATACTGTGAGCAGCTGACTGCCGTCGGTTTCATGATGTTGAGAGACGGACAGTATATGAGAGATGACTCTTCTTGACCTGTGCCTGTATTCAAGTGtctctgagtaggagtgctgatctagggtcagtttagccttttagatcataatgaagaCGATTatgtggacctgatcctagatatgCCTTCTCAACGTGTCACTCTTCACCCATCTATACTAGCTGTAAAACAGTAGGACATTTCTGTGATTTGACCCGAATGATAACTTTACAGTCGTTTTTTTGTTTAGCATTGTGTAAATCAAGTAGAATAATTCATTGAGGAATAGTTGCACCTTATTTATCTATAGTATATATCCAACTTTTAGAATATTGTCTTGGCTTTTGCCCTAATATGGTTTCCTTGAATATGATGTGATGCCTTCAGCCTTAGGCATTCCCATCACTTCCACTCTTTATAACTGCATTTATTGTCTATAGTTCAACTTCTGACAGTTGAGATTTTGACATTTGAAAGTGAACTGACACAACCGTGTTCCCACAACATGATAACCAGCAGCTTGACTTAATTGGTTAAGTTCCCTTGCTATTTTGTCTATCGATAGCGAGCTACACTGTACTctggtgatatatatatatatatatatatcttcaaCGTCAGAAGACAATAGAGGGAATAATGTGGGGGAAATAGCATGACGTAAGCAGCTAATTCACCTCATCAATAGAGAATTGTGACAGCATTTGAAAGACAACCAACTTGTATGCTAAAGAAAAATGATTTTAAATGTGACTGACCAGCAATGTGAAAGTAGAACACTGGGGTGTTTAACTAATGTTCTCCAGTGCATTTGTGCTGTATTCTATGATTATGTCATTGTTGATGGAGATAACTAGGAGAGCCTGCTCTTCTGTATGCTTCTTTTTAGACTAGGCTGTTTTGACAAACAAGGCAGAGATTGTATATGTTAGAAGTTGCTGCTCAAATACCCCAAAGCCTTATTAGAATTATGAATAGCAATTATTTCAAGCTTCATCAAAACAAATGTTTTCTTTCCAACAGTGGTTGGTTGGAACCaatacaaaaaaactatacaataCAAAGTGATTGACAGTTATTGGTATAACTCATTTGAGCCATCAAAatgacagaaaaaaaaaaaaatgttttcttggTACCAAAATATTTAGCTGGCTATGTTTGCTACAAATGTCTTTCCTGGGTAAAGAACCATTGTTGCATAGGGGGAAGAACCcagagacatatatatatatatatatacagtattaatGTATATATGGCTCTGATAGAATCCAGTTCCCCTATAGGGTGTCCTGCATGTACGTATGTGACATGCAGCCGTGTATAGAGAAAACAAACTGCTTGTTAAGTGTTTGAAACTGTGGTGTTTCAGAAAGGATACTTTAACCTTTTTCCTTTAGGTGTTGGTCTCaaattaaacaaataaataaaacaaaaaatctaAAGATAAAAACCTTTTGGAGTGTTTTTCAGACTCCCAAATCAAAATGTTAATAATAAGCTGTTGTACAACGTCTGGTTGATAAGAAATATCGGTTATTTTTTTGTACCTTTAAAAACAacttgggggggaggggggagggggggtgctgAGTCTTTTACCCCTTGTCCTATTTTCCTTTTAAAGGACTAGCCTAGCTTTTTAAACATTAACCCGTTAGAGAAATGTTTGTTTGAGGAAATAAGCTTTTAAAGTGGCAGCCGCTCCACTTAAAACCAGGGGTTAAATATGGATTTTGTAAGGTGATGaaactgtcctgtctctctgtcccacaaAATTGCTAAATTTTTCATATAAATCTATTGAACTGTCACTGTACCCTGAAGGTGGTGGGACTATTGGTTGTTGGTCACACCCCTTCCTCCCACCTCCCAATTTAATCCCTGCTCGTCATAACACACTGGatacttgtatgtgtgtgtgtaatatatatattatatatatatatatataatatatatatttactttgTCTTCATtacgtttctctcctctcttcagacTGTTCTCTATAGTTTTACTACTTTAGATTCTCCATTTTGCCTTTTCTCCTGTGAAAATCTGATTCCTAAAGGTGGGCC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1182178 True 2529 lncRNA 0.38 2 11247457 11250029

Neighbor

gene id symbol gene type direction distance location
LOC110536956 LOC106568459 coding downstream 16355 11212672 ~ 11231102 (-)
LOC110536955 LOC106568458 coding downstream 195672 11046648 ~ 11051785 (-)
LOC110536954 LOC106568457 coding downstream 255882 10969940 ~ 10991575 (-)
LOC110536953 LOC106561351 coding downstream 286434 10958443 ~ 10961023 (-)
LOC110536951 cr032 coding downstream 387307 10850171 ~ 10860150 (-)
LOC110536958 LOC106568460 coding upstream 5130 11255159 ~ 11320076 (-)
LOC118937658 NA coding upstream 154968 11404997 ~ 11406085 (-)
LOC110536959 LOC106568452 coding upstream 174228 11424257 ~ 11457254 (-)
LOC118937665 NA coding upstream 265358 11515387 ~ 11516091 (-)
LOC110513404 LOC106568437 coding upstream 371304 11621333 ~ 11665670 (-)
G1037414 NA non-coding downstream 6273 11240774 ~ 11241184 (-)
G1037395 NA non-coding downstream 41053 11205968 ~ 11206404 (-)
G1037387 NA non-coding downstream 49845 11197385 ~ 11197612 (-)
G1037385 NA non-coding downstream 58106 11189120 ~ 11189351 (-)
G1037384 NA non-coding downstream 61003 11186213 ~ 11186454 (-)
G1037419 NA non-coding upstream 1746 11251775 ~ 11251964 (-)
G1037422 NA non-coding upstream 11424 11261453 ~ 11262059 (-)
G1037440 NA non-coding upstream 71195 11321224 ~ 11321494 (-)
G1037441 NA non-coding upstream 72131 11322160 ~ 11322452 (-)
G1037442 NA non-coding upstream 72613 11322642 ~ 11322853 (-)
G1037217 NA other downstream 141137 11105935 ~ 11106320 (-)
G1037216 NA other downstream 144009 11103084 ~ 11103448 (-)
sema4d sema4d other downstream 1337626 9901109 ~ 9983793 (-)
G1038258 NA other upstream 356322 11606351 ~ 11615943 (-)
G1038295 NA other upstream 416958 11666987 ~ 11738777 (-)
G1038606 NA other upstream 1039495 12289524 ~ 12292538 (-)
G1038943 NA other upstream 1470472 12720501 ~ 12721154 (-)
G1039364 NA other upstream 1897629 13147658 ~ 13176443 (-)

Expression


Co-expression Network