G1097061


Basic Information

Item Value
gene id G1097061
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 64134042 ~ 64134606 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1247688
gtgtagagaggctagcactggagtaatatgatcaaattttttggttctagtcaggattctagcagccgtatttagcactaactgaagtttatttagtgctttatccgggtagccggaaagtagagcattgcagtagtctaacctggaagtgacaaaagcatggattaatttttctgcatcatttttggacagaaagttcctgatttttgcaatgttacgtagatggaaaaaagctgtccttgaaatggtcttgatatgttcttcaaaagagagatcagggtccagagtaacgccaaggtccttcacagttttatttgagacgactgtacaaccattaagattaattgtcagattcaacagaagatctctttgtttcttgggacctagaacaagcatctctgttttgtccgagtttaaaagtagaaagtccACTACCATTGCAGCCTGCGCGAGGATGTCTGTTGGGAGTTGGCCTGCAAGGATACCAATCTTatcttcgaccagctggtggacatgtccattcggctggataacctgctggtcacccaacatatgtctccgaatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1247688 True 565 lncRNA 0.42 1 64134042 64134606

Neighbor

gene id symbol gene type direction distance location
LOC110538933 LOC106600901 coding upstream 225369 63888086 ~ 63908673 (+)
trnas-uga-37 NA coding upstream 255355 63878606 ~ 63878687 (+)
trnas-uga-36 NA coding upstream 255977 63877984 ~ 63878065 (+)
trnas-uga-35 NA coding upstream 256279 63877682 ~ 63877763 (+)
trnas-uga-34 NA coding upstream 256905 63877056 ~ 63877137 (+)
baiap2l2a LOC106600898 coding downstream 8249 64142855 ~ 64172178 (+)
LOC110538012 LOC106600897 coding downstream 97533 64232139 ~ 64242953 (+)
si:dkey-110g7.8 LOC106600891 coding downstream 235352 64369958 ~ 64376356 (+)
LOC110538020 LOC106600890 coding downstream 272767 64407373 ~ 64416073 (+)
LOC110538022 LOC106600886 coding downstream 295899 64430505 ~ 64438581 (+)
G1097007 LOC106607434 non-coding upstream 29756 64044587 ~ 64104286 (+)
G1097005 LOC106566277 non-coding upstream 49604 64060223 ~ 64084438 (+)
G1096999 NA non-coding upstream 57234 64032658 ~ 64076808 (+)
G1097000 NA non-coding upstream 78512 64037422 ~ 64055530 (+)
G1097006 NA non-coding upstream 86095 64045811 ~ 64047947 (+)
G1097062 NA non-coding downstream 1054 64135660 ~ 64135899 (+)
G1097064 NA non-coding downstream 5388 64139994 ~ 64140193 (+)
G1097070 NA non-coding downstream 15849 64150455 ~ 64151039 (+)
G1097047 NA non-coding downstream 31669 64166275 ~ 64169646 (+)
G1097111 NA non-coding downstream 85644 64220250 ~ 64220640 (+)
LOC100305204 hebp2 other upstream 799348 63302491 ~ 63334694 (+)
LOC118937701 LOC100136295 other upstream 1686568 62441706 ~ 62448515 (+)
G1095540 NA other upstream 2781697 61037739 ~ 61352345 (+)
mmp25a LOC106600705 other upstream 3168447 60931123 ~ 60965921 (+)
G1097063 NA other downstream 1752 64136358 ~ 64136704 (+)
G1097116 NA other downstream 93395 64228001 ~ 64228684 (+)
G1097122 NA other downstream 120006 64254612 ~ 64255064 (+)
G1100432 NA other downstream 1298534 65433140 ~ 65433457 (+)

Expression


Co-expression Network