G1097117


Basic Information

Item Value
gene id G1097117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 64228770 ~ 64229243 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1247744
cttcaaacatctgctatctgagcagctaaccgatcgctgcagctgtacatagtctattggtaaatagcccacccattttcacctacctcatccccatactgtttttatttatttatttttctgctcttttgcacaccaatatctctacctgtacataaccatctgatcatttatcactccagtgttaatctgcataattgtaattatttgcctaccttctcatgccttttgcacacaatgtatatatacactccccttttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgccttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcctacctggttaaataaaggtgaaataaaaaataaaaataaaaaacacgtGTGATCTTGAGGGATCACATGTGCTTTTATGTAAAGTTAATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1247744 True 474 lncRNA 0.37 1 64228770 64229243

Neighbor

gene id symbol gene type direction distance location
baiap2l2a LOC106600898 coding upstream 56592 64142855 ~ 64172178 (+)
LOC110538933 LOC106600901 coding upstream 320097 63888086 ~ 63908673 (+)
trnas-uga-37 NA coding upstream 350083 63878606 ~ 63878687 (+)
trnas-uga-36 NA coding upstream 350705 63877984 ~ 63878065 (+)
trnas-uga-35 NA coding upstream 351007 63877682 ~ 63877763 (+)
LOC110538012 LOC106600897 coding downstream 2896 64232139 ~ 64242953 (+)
si:dkey-110g7.8 LOC106600891 coding downstream 140715 64369958 ~ 64376356 (+)
LOC110538020 LOC106600890 coding downstream 178130 64407373 ~ 64416073 (+)
LOC110538022 LOC106600886 coding downstream 201262 64430505 ~ 64438581 (+)
LOC110538024 LOC106600885 coding downstream 214517 64443760 ~ 64445157 (+)
G1097115 NA non-coding upstream 1583 64226987 ~ 64227187 (+)
G1097113 NA non-coding upstream 4800 64223679 ~ 64223970 (+)
G1097111 NA non-coding upstream 8130 64220250 ~ 64220640 (+)
G1097047 NA non-coding upstream 59124 64166275 ~ 64169646 (+)
G1097070 NA non-coding upstream 77731 64150455 ~ 64151039 (+)
G1097055 NA non-coding downstream 13968 64243211 ~ 64243564 (+)
G1097052 NA non-coding downstream 15301 64244544 ~ 64245781 (+)
G1097121 NA non-coding downstream 23954 64253197 ~ 64253474 (+)
G1097126 NA non-coding downstream 35249 64264492 ~ 64264703 (+)
G1097128 NA non-coding downstream 37572 64266815 ~ 64267253 (+)
G1097116 NA other upstream 86 64228001 ~ 64228684 (+)
G1097063 NA other upstream 92066 64136358 ~ 64136704 (+)
LOC100305204 hebp2 other upstream 894076 63302491 ~ 63334694 (+)
LOC118937701 LOC100136295 other upstream 1781296 62441706 ~ 62448515 (+)
G1097122 NA other downstream 25369 64254612 ~ 64255064 (+)
G1100432 NA other downstream 1203897 65433140 ~ 65433457 (+)
LOC110538063 abi1 other downstream 1919966 66148710 ~ 66168256 (+)
LOC110538072 psd3 other downstream 2432721 66661875 ~ 66670815 (+)

Expression


Co-expression Network