G1097052


Basic Information

Item Value
gene id G1097052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 64244544 ~ 64245781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1247679
tagataataaacagtagcagcagtgtatgtgatgagtcaaaagagttagtgcaaagagggtcaatgcagatagtctgggtagctatttgattcACTATTtatagtcttatggcttggcggtagaagttgttcagggtcctgttggttccagacatgGTGTATCAGTACCGCTTGCTGCGtggtatcagagagaacagtctgtgacttgggtggATGGTGTCTTTGACAAAtgttttcctctgacaccgcctggtatagaggtcctggatggcaggggcatacacactaccctctgtagcgccttgcagtcggatgccaagcagttgccataccaagcagtgatgcagtgaGTCAAGATGCCtttaatggtgcagctgtagaacattttgaggatctgagggcccaagctaaatattttcagcctcctgagggagaagaggcatTGTCGTACCTTCTTCgcgaatgtgtaggtgtgtgtggatCATGTTtatttgttagtgatgtggaactaaggaacttgaatctttcatcctgctccacaacagccccatcgatgtggtaGGAGCGTGCTCAgctccatgatcagctcctttgtcttgctgatgttgagggagaggccgggtcactgacctcctctctgtaggtggtctcagcaaacttaatgatggtgttggagttgtgcacggccaagcagtcgtgggtgaacagggagtacaggaggggactaagcacgcacccctgaggggcccacgtgttgagggtcagcgtggcaagCTTTTTGCTTTCTTGGTTAAATGTGAGGACACATTTTAAAAATAGAGGGGAAAGATGTAACAGGGTAGAACTGTTGAGTTGGTGAATGCAGCCTTGTGCCTCTGTCAGTGCCAAGTGTGTGAGATTGTTGATTTTAATTAAGGGTATGGCCTTCAGTATTTTACCTGGCTGTTCTTGTTGTTCTACAGATATGCATTACCATGAGAATTGCAAATTCTGAAGCATATCCGGGGATCTTGTGTTTATGGCAAGAATACCCGTATGCCAATTTGACCCGCTCTCCTTCACCCATGGCATGCCCTCCTGAGAGTATTGTGCAACATGTCCTGTGACCACGAGTAATTGATCTGATCTGTGTTATGCCATAGCTCAGTCATATATTGAATGTAATTGTGAATTTGTATGTCAACTAAAGTTTTTTTATGTCCTGTGATAGGGAATCAGTATGAGCTAGAGCTTCCAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1247679 True 1238 lncRNA 0.46 1 64244544 64245781

Neighbor

gene id symbol gene type direction distance location
LOC110538012 LOC106600897 coding upstream 1591 64232139 ~ 64242953 (+)
baiap2l2a LOC106600898 coding upstream 72366 64142855 ~ 64172178 (+)
LOC110538933 LOC106600901 coding upstream 335871 63888086 ~ 63908673 (+)
trnas-uga-37 NA coding upstream 365857 63878606 ~ 63878687 (+)
trnas-uga-36 NA coding upstream 366479 63877984 ~ 63878065 (+)
si:dkey-110g7.8 LOC106600891 coding downstream 124177 64369958 ~ 64376356 (+)
LOC110538020 LOC106600890 coding downstream 161592 64407373 ~ 64416073 (+)
LOC110538022 LOC106600886 coding downstream 184724 64430505 ~ 64438581 (+)
LOC110538024 LOC106600885 coding downstream 197979 64443760 ~ 64445157 (+)
LOC110538023 LOC106600884 coding downstream 213516 64459297 ~ 64461117 (+)
G1097055 NA non-coding upstream 980 64243211 ~ 64243564 (+)
G1097117 NA non-coding upstream 15301 64228770 ~ 64229243 (+)
G1097115 NA non-coding upstream 17357 64226987 ~ 64227187 (+)
G1097113 NA non-coding upstream 20574 64223679 ~ 64223970 (+)
G1097111 NA non-coding upstream 23904 64220250 ~ 64220640 (+)
G1097121 NA non-coding downstream 7416 64253197 ~ 64253474 (+)
G1097126 NA non-coding downstream 18711 64264492 ~ 64264703 (+)
G1097128 NA non-coding downstream 21034 64266815 ~ 64267253 (+)
G1099197 NA non-coding downstream 68385 64314166 ~ 64314401 (+)
G1099203 NA non-coding downstream 78225 64324006 ~ 64324225 (+)
G1097116 NA other upstream 15860 64228001 ~ 64228684 (+)
G1097063 NA other upstream 107840 64136358 ~ 64136704 (+)
LOC100305204 hebp2 other upstream 909850 63302491 ~ 63334694 (+)
LOC118937701 LOC100136295 other upstream 1797070 62441706 ~ 62448515 (+)
G1097122 NA other downstream 8831 64254612 ~ 64255064 (+)
G1100432 NA other downstream 1187359 65433140 ~ 65433457 (+)
LOC110538063 abi1 other downstream 1903428 66148710 ~ 66168256 (+)
LOC110538072 psd3 other downstream 2416183 66661875 ~ 66670815 (+)

Expression


Co-expression Network