Gene
RNA
| Item | Value |
|---|---|
| gene id | G1101016 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 65874371 ~ 65928968 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1252043 | True | 243 | lncRNA | 0.50 | 2 | 65874371 | 65928968 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539158 | LOC106600867 | coding | upstream | 39050 | 65833623 ~ 65835321 (+) |
| LOC110539157 | LOC106596190 | coding | upstream | 54033 | 65818970 ~ 65820338 (+) |
| LOC110538052 | ifn1 | coding | upstream | 66754 | 65802490 ~ 65807617 (+) |
| LOC110538049 | LOC106600867 | coding | upstream | 81122 | 65791278 ~ 65793249 (+) |
| LOC110538043 | ifn1 | coding | upstream | 114311 | 65755903 ~ 65760060 (+) |
| LOC110538942 | ifne | coding | downstream | 82239 | 66011207 ~ 66012308 (+) |
| LOC110538062 | LOC106600863 | coding | downstream | 176375 | 66105343 ~ 66142689 (+) |
| LOC110538065 | LOC106600861 | coding | downstream | 213859 | 66142827 ~ 66146921 (+) |
| LOC110538064 | NA | coding | downstream | 218158 | 66147126 ~ 66148605 (+) |
| LOC110538063 | abi1 | coding | downstream | 219742 | 66148710 ~ 66168256 (+) |
| G1100821 | NA | non-coding | upstream | 256962 | 65609578 ~ 65617409 (+) |
| G1100800 | NA | non-coding | upstream | 276703 | 65575619 ~ 65597668 (+) |
| G1100472 | NA | non-coding | upstream | 341500 | 65524903 ~ 65532871 (+) |
| G1100443 | NA | non-coding | upstream | 423802 | 65450229 ~ 65450569 (+) |
| G1101312 | NA | non-coding | downstream | 249962 | 66178930 ~ 66179473 (+) |
| G1101321 | NA | non-coding | downstream | 258820 | 66187788 ~ 66188028 (+) |
| G1101390 | NA | non-coding | downstream | 355100 | 66284068 ~ 66284290 (+) |
| G1101575 | NA | non-coding | downstream | 362405 | 66291373 ~ 66291581 (+) |
| G1101607 | NA | non-coding | downstream | 402983 | 66331951 ~ 66332170 (+) |
| G1100432 | NA | other | upstream | 440914 | 65433140 ~ 65433457 (+) |
| si:dkey-110g7.8 | LOC106600891 | other | upstream | 1498157 | 64369958 ~ 64376356 (+) |
| G1097122 | NA | other | upstream | 1619307 | 64254612 ~ 64255064 (+) |
| G1097116 | NA | other | upstream | 1645687 | 64228001 ~ 64228684 (+) |
| G1097063 | NA | other | upstream | 1737667 | 64136358 ~ 64136704 (+) |
| LOC110538072 | psd3 | other | downstream | 732996 | 66661875 ~ 66670815 (+) |
| G1101805 | NA | other | downstream | 795693 | 66724661 ~ 66822261 (+) |
| G1102021 | NA | other | downstream | 1129767 | 67058735 ~ 67059407 (+) |
| G1102115 | NA | other | downstream | 1296384 | 67225352 ~ 67225799 (+) |
