G1101575


Basic Information

Item Value
gene id G1101575
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 66291373 ~ 66291581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1252654
CAATATGTGTGTTATCATGCCACTAAATCATGCTAATAAAACCACCACAACAAAACAAGCTACAATGCCTATGGCAGTAAAGTTAGGTTAACTCTCAGGGATTCATAAGCTGTGTTTCTCCCACTTCCAGATCCCTGCCAATATCTGCTACAGAGGGAAATCTTCCAACCACAGGCTGTATTAGGTGATATTTCAGAGCAACCATGCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1252654 True 209 lncRNA 0.42 1 66291373 66291581

Neighbor

gene id symbol gene type direction distance location
LOC110538063 abi1 coding upstream 123117 66148710 ~ 66168256 (+)
LOC110538064 NA coding upstream 142768 66147126 ~ 66148605 (+)
LOC110538065 LOC106600861 coding upstream 144452 66142827 ~ 66146921 (+)
LOC110538062 LOC106600863 coding upstream 148684 66105343 ~ 66142689 (+)
LOC110538942 ifne coding upstream 279065 66011207 ~ 66012308 (+)
rarab LOC106600859 coding downstream 11207 66302788 ~ 66485858 (+)
LOC110538943 NA coding downstream 213931 66505512 ~ 66526854 (+)
LOC110538074 LOC106600856 coding downstream 252564 66544145 ~ 66560430 (+)
LOC110538073 LOC106600855 coding downstream 298121 66589702 ~ 66633514 (+)
LOC110538075 LOC106600854 coding downstream 352446 66644027 ~ 66653962 (+)
G1101390 NA non-coding upstream 7083 66284068 ~ 66284290 (+)
G1101321 NA non-coding upstream 103345 66187788 ~ 66188028 (+)
G1101312 NA non-coding upstream 111900 66178930 ~ 66179473 (+)
G1101009 NA non-coding upstream 320309 65859820 ~ 65971064 (+)
G1101607 NA non-coding downstream 40370 66331951 ~ 66332170 (+)
G1101609 NA non-coding downstream 42575 66334156 ~ 66398123 (+)
G1101636 NA non-coding downstream 95603 66387184 ~ 66390837 (+)
G1101651 NA non-coding downstream 122859 66414440 ~ 66414716 (+)
G1101692 NA non-coding downstream 185688 66477269 ~ 66477793 (+)
G1100432 NA other upstream 857916 65433140 ~ 65433457 (+)
si:dkey-110g7.8 LOC106600891 other upstream 1915159 64369958 ~ 64376356 (+)
G1097122 NA other upstream 2036309 64254612 ~ 64255064 (+)
G1097116 NA other upstream 2062689 64228001 ~ 64228684 (+)
LOC110538072 psd3 other downstream 370383 66661875 ~ 66670815 (+)
G1101805 NA other downstream 433080 66724661 ~ 66822261 (+)
G1102021 NA other downstream 767154 67058735 ~ 67059407 (+)
G1102115 NA other downstream 933771 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 1513768 67793428 ~ 67810071 (+)

Expression


Co-expression Network