G1101607


Basic Information

Item Value
gene id G1101607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 66331951 ~ 66332170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1252690
GCCACGGTAGGGGGGGGGTTAACAAATGGCCTTGTGGGTTGCGTCAGAGTGAGCGAGCACTTGCTGTTAGGTTTCATCATGCGTGATTCTGGCACACtgtggagagagacggagagttaGTTCTTGCTTCCCGCTAGGAAGGGTCTGCCCTGAATCCACAAAGCCCTGGACACGCACGCGTTCAGAATACCATACCTGTCTACCCTCCAGCCAGAGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1252690 True 220 lncRNA 0.56 1 66331951 66332170

Neighbor

gene id symbol gene type direction distance location
LOC110538063 abi1 coding upstream 163695 66148710 ~ 66168256 (+)
LOC110538064 NA coding upstream 183346 66147126 ~ 66148605 (+)
LOC110538065 LOC106600861 coding upstream 185030 66142827 ~ 66146921 (+)
LOC110538062 LOC106600863 coding upstream 189262 66105343 ~ 66142689 (+)
LOC110538942 ifne coding upstream 319643 66011207 ~ 66012308 (+)
LOC110538943 NA coding downstream 173342 66505512 ~ 66526854 (+)
LOC110538074 LOC106600856 coding downstream 211975 66544145 ~ 66560430 (+)
LOC110538073 LOC106600855 coding downstream 257532 66589702 ~ 66633514 (+)
LOC110538075 LOC106600854 coding downstream 311857 66644027 ~ 66653962 (+)
LOC110538072 psd3 coding downstream 329705 66661875 ~ 66670815 (+)
G1101575 NA non-coding upstream 40370 66291373 ~ 66291581 (+)
G1101390 NA non-coding upstream 47661 66284068 ~ 66284290 (+)
G1101321 NA non-coding upstream 143923 66187788 ~ 66188028 (+)
G1101312 NA non-coding upstream 152478 66178930 ~ 66179473 (+)
G1101016 NA non-coding upstream 402983 65874371 ~ 65928968 (+)
G1101609 NA non-coding downstream 1986 66334156 ~ 66398123 (+)
G1101636 NA non-coding downstream 55014 66387184 ~ 66390837 (+)
G1101651 NA non-coding downstream 82270 66414440 ~ 66414716 (+)
G1101692 NA non-coding downstream 145099 66477269 ~ 66477793 (+)
rarab LOC106600859 non-coding downstream 153133 66302788 ~ 66485858 (+)
G1100432 NA other upstream 898494 65433140 ~ 65433457 (+)
si:dkey-110g7.8 LOC106600891 other upstream 1955737 64369958 ~ 64376356 (+)
G1097122 NA other upstream 2076887 64254612 ~ 64255064 (+)
G1097116 NA other upstream 2103267 64228001 ~ 64228684 (+)
G1101805 NA other downstream 392491 66724661 ~ 66822261 (+)
G1102021 NA other downstream 726565 67058735 ~ 67059407 (+)
G1102115 NA other downstream 893182 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 1473179 67793428 ~ 67810071 (+)

Expression


Co-expression Network