G1101696


Basic Information

Item Value
gene id G1101696
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 66486050 ~ 66486535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1252789
tatttTTTTAGGTTCCTTATTGGCCCCTCAATGTAGTTTAGAcaatacattgagtgtacaaaacattaggaacacatgctatttccatgacagactgtcgaggtgaatccaggtaaatgTTACGAtcgcttattgatgtcacttgttaaatccacttcaatcagtgtagaggaaggggaggagataggttaaagaaggatttttaagccttgagacatgggttgtgtatgtgtgccattcagagggtaaatgggcaagacaaaatatttaagtgcctttaaatggggtatggtagtaggtgtcaggcgcacctgcttgtatcaagaactgcaactctgcttggtttttcacactcaaccgtttcccctgtgtatcaagaatggtccaccacccaaattaCATCTAGCCAACTGTTGGGAGCATTcatgggggggtgcaactcaatattaggaaggtgtttttcatgttttgtacactgtctttctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1252789 True 486 lncRNA 0.41 1 66486050 66486535

Neighbor

gene id symbol gene type direction distance location
rarab LOC106600859 coding upstream 192 66302788 ~ 66485858 (+)
LOC110538063 abi1 coding upstream 317794 66148710 ~ 66168256 (+)
LOC110538064 NA coding upstream 337445 66147126 ~ 66148605 (+)
LOC110538065 LOC106600861 coding upstream 339129 66142827 ~ 66146921 (+)
LOC110538062 LOC106600863 coding upstream 343361 66105343 ~ 66142689 (+)
LOC110538943 NA coding downstream 18977 66505512 ~ 66526854 (+)
LOC110538074 LOC106600856 coding downstream 57610 66544145 ~ 66560430 (+)
LOC110538073 LOC106600855 coding downstream 103167 66589702 ~ 66633514 (+)
LOC110538075 LOC106600854 coding downstream 157492 66644027 ~ 66653962 (+)
LOC110538072 psd3 coding downstream 175340 66661875 ~ 66670815 (+)
G1101692 NA non-coding upstream 8257 66477269 ~ 66477793 (+)
G1101651 NA non-coding upstream 71334 66414440 ~ 66414716 (+)
G1101609 NA non-coding upstream 87927 66334156 ~ 66398123 (+)
G1101636 NA non-coding upstream 95213 66387184 ~ 66390837 (+)
G1101697 NA non-coding downstream 47 66486582 ~ 66486872 (+)
G1101698 NA non-coding downstream 511 66487046 ~ 66503793 (+)
G1101754 NA non-coding downstream 103643 66590178 ~ 66590937 (+)
G1101767 NA non-coding downstream 120834 66607369 ~ 66679468 (+)
G1101805 NA non-coding downstream 238126 66724661 ~ 66822261 (+)
G1100432 NA other upstream 1052593 65433140 ~ 65433457 (+)
si:dkey-110g7.8 LOC106600891 other upstream 2109836 64369958 ~ 64376356 (+)
G1097122 NA other upstream 2230986 64254612 ~ 64255064 (+)
G1097116 NA other upstream 2257366 64228001 ~ 64228684 (+)
G1102021 NA other downstream 572200 67058735 ~ 67059407 (+)
G1102115 NA other downstream 738817 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 1318814 67793428 ~ 67810071 (+)

Expression


Co-expression Network