G1102021


Basic Information

Item Value
gene id G1102021
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 67058735 ~ 67059407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1253139
cgtgcgcatcagggagggggacgagtggaagacggcgtttaacactccgttagggcactttgaataccgggttcttcctttcggcctcgctaacgctccagctgtctttcaggcattagtcaatgatgtcctgagagacatgctgaacatctttgttttcgtttaccttgacgatatcctgattttttcaccgtcactccagattcatgttcagcacgttcgacgtgtcctccagcgccttttagagaattgtctttttgtgaaggctgagaagtgcacttttcatgcctcctccgtcacatttctcggttctgttatttccgctgaaggcattaagatggatcccgctaaggtccaagctgtcattgattggcccgcccctaagtcacgcgtcgagctgcagcgctttctcggcttcgcaaacttctatcgtcgtttcatccgtaatttcggtcaggtggcagctcttctcacagcccttacttctgtcaagacgtgctttaagtggtccgtttccgcccagggagcttttgatctcctcaagaatcgttttacatccgctcctatccttgttacacctgacgtctctagacagttcgttgtcgaggttgacgcgtcagaggtgggcgtgggagccattctttctcagcgctccctctctgacgacaaggtc
>TU1253140
cgtgcgcatcagggagggggacgagtggaagacggcgtttaacactccgttagggcactttgaataccgggttcttcctttcggcctcgctaacgctccagctgtctttcaggcattagtcaatgatgtcctgagagacatgctgaacatctttgttttcgtttaccttgacgatatcctgattttttcaccgtcactccagattcatgttcagcacgttcgacgtgtcctccagcgccttttagagaattgtctttttgtgaaggctgagaagtgcacttttcatgcctcctccgtcacatttctcggttctgttatttccgctgaaggcattaagatggatcccgctaaggtccaagctgtcattgattggcccgcccctaagtcacgcgtcgagctgcagcgctttctcggcttcgcaaacttctatcgtcgtttcatccgtaatttcggtcaggtggcagctcttctcacagcccttacttctgtcaagacgtgctttaagtggtccgtttccgcccagggagcttttgatctcctcaagaatcgttttacatccgctcctatccttgttacacctga
>TU1253136
tctgttatttccgctgaaggcattaagatggatcccgctaaggtccaagctgtcattgattggcccgcccctaagtcacgcgtcgagctgcagcgctttctcggcttcgcaaacttctatcgtcgtttcatccgtaatttcggtcaggtggcagctcttctcacagcccttacttctgtcaagacgtgctttaagtggtccgtttccgcccagggagcttttgatctcctcaagaatcgttttacatccgctcctatccttgttacacctga

Function

NR:

description
PREDICTED: uncharacterized mitochondrial protein AtMg00860-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1253139 False 673 TUCP 0.51 1 67058735 67059407
TU1253140 False 582 TUCP 0.50 1 67058735 67059316
TU1253136 True 272 lncRNA 0.51 1 67059045 67059316

Neighbor

gene id symbol gene type direction distance location
LOC110538082 LOC106600849 coding upstream 31907 67008013 ~ 67027138 (+)
LOC110538077 LOC106600959 coding upstream 380380 66674135 ~ 66678665 (+)
LOC110538072 psd3 coding upstream 388230 66661875 ~ 66670815 (+)
LOC110538075 LOC106600854 coding upstream 405083 66644027 ~ 66653962 (+)
LOC110538073 LOC106600855 coding upstream 425531 66589702 ~ 66633514 (+)
LOC110538084 LOC106600841 coding downstream 89485 67148801 ~ 67164013 (+)
LOC118937895 NA coding downstream 221647 67280963 ~ 67292113 (+)
LOC110538094 NA coding downstream 421746 67481062 ~ 67491128 (+)
LOC110538945 LOC106607489 coding downstream 511908 67571224 ~ 67574023 (+)
LOC110538098 LOC106607492 coding downstream 577808 67637124 ~ 67643446 (+)
G1101998 NA non-coding upstream 42617 67016088 ~ 67016428 (+)
G1101984 NA non-coding upstream 58042 66993317 ~ 67001003 (+)
G1101980 NA non-coding upstream 73401 66985277 ~ 66985644 (+)
G1101979 NA non-coding upstream 74041 66984180 ~ 66985004 (+)
G1101974 NA non-coding upstream 78887 66979929 ~ 66980158 (+)
G1102022 NA non-coding downstream 2346 67061662 ~ 67061889 (+)
G1102024 NA non-coding downstream 3575 67062891 ~ 67063127 (+)
G1102026 LOC106600846 non-coding downstream 5302 67064618 ~ 67071642 (+)
G1102043 NA non-coding downstream 33681 67092997 ~ 67093240 (+)
G1102044 NA non-coding downstream 35390 67094706 ~ 67094932 (+)
G1101805 NA other upstream 287654 66724661 ~ 66822261 (+)
LOC110538063 abi1 other upstream 890848 66148710 ~ 66168256 (+)
G1100432 NA other upstream 1625588 65433140 ~ 65433457 (+)
si:dkey-110g7.8 LOC106600891 other upstream 2682831 64369958 ~ 64376356 (+)
G1102115 NA other downstream 166036 67225352 ~ 67225799 (+)
LOC110538103 LOC106600823 other downstream 746033 67793428 ~ 67810071 (+)
G1103416 eif1b other downstream 928378 67987694 ~ 68048717 (+)
G1104149 LOC106600798 other downstream 1444725 68504041 ~ 68505295 (+)
G1104162 NA other downstream 1468965 68528281 ~ 68531861 (+)

Expression


Co-expression Network