G1102118


Basic Information

Item Value
gene id G1102118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 67233283 ~ 67233683 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1253249
gtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttggtgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaagaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgctgttgattcttcacaaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtgtaagGCACGGCGCTATGCAAACAAACATAAATGAACGTGTGACACAGGGCGACGTAACAAGCGTAGTGTGACAGTGGTATTAGTTATACGGG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1253249 True 401 lncRNA 0.39 1 67233283 67233683

Neighbor

gene id symbol gene type direction distance location
LOC110538084 LOC106600841 coding upstream 69270 67148801 ~ 67164013 (+)
LOC110538082 LOC106600849 coding upstream 206145 67008013 ~ 67027138 (+)
LOC110538077 LOC106600959 coding upstream 554618 66674135 ~ 66678665 (+)
LOC110538072 psd3 coding upstream 562468 66661875 ~ 66670815 (+)
LOC110538075 LOC106600854 coding upstream 579321 66644027 ~ 66653962 (+)
LOC118937895 NA coding downstream 47280 67280963 ~ 67292113 (+)
LOC110538094 NA coding downstream 247379 67481062 ~ 67491128 (+)
LOC110538945 LOC106607489 coding downstream 337541 67571224 ~ 67574023 (+)
LOC110538098 LOC106607492 coding downstream 403441 67637124 ~ 67643446 (+)
LOC110538099 ube2z coding downstream 414270 67647953 ~ 67672094 (+)
G1102117 NA non-coding upstream 5337 67227747 ~ 67227946 (+)
G1102101 NA non-coding upstream 36012 67197025 ~ 67197271 (+)
G1102098 NA non-coding upstream 41538 67191406 ~ 67191745 (+)
G1102074 NA non-coding upstream 90477 67138632 ~ 67142806 (+)
G1102044 NA non-coding upstream 138351 67094706 ~ 67094932 (+)
G1102706 NA non-coding downstream 22168 67255851 ~ 67256069 (+)
G1102728 NA non-coding downstream 36169 67269852 ~ 67270130 (+)
G1102766 NA non-coding downstream 67286 67300969 ~ 67301177 (+)
G1102780 NA non-coding downstream 79412 67313095 ~ 67313419 (+)
G1102791 NA non-coding downstream 87167 67320850 ~ 67321123 (+)
G1102115 NA other upstream 7484 67225352 ~ 67225799 (+)
G1102021 NA other upstream 173876 67058735 ~ 67059407 (+)
G1101805 NA other upstream 461892 66724661 ~ 66822261 (+)
LOC110538063 abi1 other upstream 1065086 66148710 ~ 66168256 (+)
LOC110538103 LOC106600823 other downstream 571666 67793428 ~ 67810071 (+)
G1103416 eif1b other downstream 754011 67987694 ~ 68048717 (+)
G1104149 LOC106600798 other downstream 1270358 68504041 ~ 68505295 (+)
G1104162 NA other downstream 1294598 68528281 ~ 68531861 (+)
LOC110538155 LOC106600992 other downstream 2082049 69315451 ~ 69321518 (+)

Expression


Co-expression Network