XLOC_030065 (tp53)


Basic Information

Item Value
gene id XLOC_030065
gene name tp53
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 24086227 ~ 24097805 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058800
CTGTAACTAGGGGAATCCCCAAAACTCCACGCGGATTTGCTTTGTGGATGTCCAATAACCtccttgttttggtcattctttaAGTCGATCGACTACATATCCGGGCAATCCGAAAGTCGATAATCGTAGTTTAGTGGAGAGGAGGTCGGCAAAATCAATTCTTGCAAAGCAATGGCGCAAAACGACAGCCAAGAGTTCGCGGAGCTCTGGGAGAAGAATTTGATTATTCAGCCCCCAGGTGGTGGCTCTTGCTGGGACATCATTAATGAtgagGAGTACTTGCCGGGATCGTTTGACCccaatttttttgaaaatgtgcttGAAGAACAGCCTCAGCCATCCACTCTCCCACCAACATCCACTGTTCCGGAGACAAGCGACTATCCCGGCGATCATGGATTTAGGCTCAGGTTCCCGCAGTCTGGCACAGCAAAATCTGTAACTTGCACTtATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAGCTTGGTGCTGAATGGACAACTGTGCTACTAAACTACATGTGCAATAGCAGCTGCATGGGGGGGATGAACCGCAGGCCCATCCTCACAATCATCACTCTGGAGACTCAGGAAGGTCAGTTGCTGGGCCGGAGGTCTTTTgaggtgcgtgtgtgtgcatgtccaGGCAGAGACAGGAAAACTGAGGAGAGCAACTTCAAGAAAGACCAAGAGACCAAAACCATGGCCAAAACCACCACTGGGACCAAACGTAGTTTGGTGAAAGAATCTTCTTCAGCTACATTACGACCTGAGGGGAGCAAAAAGGCCAAGGGCTCCAGCAGCGATGAGGAGATCTTTACCCTGCAGGTGAGGGGCAGGGAGCGTTATGAAATTTTAAAGAAATTGAACGACAGTCTGGAGTTAAGTGATGTGGTGCCTGCCTCAGATGCTGAAAAGTATCGTCAGAAATTcatgacaaaaaacaaaaaagagaatCGTGAATCATCTGAGCCCAAACAGGGAAAGAAGCTGATGGTGAAGGACGAAGGAAGAAGCGACTCTGATTAAGGTGATGGGATGCTAAGAGAGAAAGAAACTGGGAGTTTTGCTCTTTTTGGACTgccttttttgcttttattacaccaaaaaaaaaagcttgtcacAGGGGTCATTTGGGGAACTGCGATACATGTGATCCATTAGTCCTGTTTGTCATGTTTCTTCTTGTTCACTCCACTGGGACCTTTGTTGCTGGACACTGATTTTGCAGTGTTTTACCAGCACTGGCGAGGGCTAAGACTAGCCTGACGTTTTACAGACCCGTTAAATGAACGTTCAGGAACGAAGTTTACCTGTGACTTttgtaaattgtaataatgcCAGTATTCGGTTGTTTTgtaagcagcatttttttttatttttataaagaaatGAGTATTAGACTAATTGGAACAAACCATCGGAATTGGTTGCAAGCCGATTATGTAATAAAAATACCAAAGCAAAACCGTTTTGTatcttatatttttttatgttaattactGCTGTTCCTATTTTTGTATTTTAGCTAATAAGAGAAGCTGCCCTTTATAACACGCTTTTAGATTTAGTACAACCATTGTTCTTTTTCAATTGAAGTAGTTGTTGATTTACTCTTGTGATTGTTGTTGAGTAATGTGGCACAGATAAGCTCATAAGTGGCCAGTCTGTTTTGACATGTGCTTGTGCAAATGGTTATGGATTGGATGTCTAAATATGAGCAAATGAAATGTCAAATACTCAGGGCATGTACAAGTCCCTCCTGGAAATCTTGATAAAACTCTTCTACTGTTTTACCTGCTATAGATTTTATGCTGGTTTTGTTTCTTATTACTGTTTACACGCATTTgccttttataaatatataagcgTGCATTTATTTGTAGCTAGCtgaatcatttataatttttctttttaagagaaatgttttaaaatacactcttt
>TCONS_00058799
CTGTAACTAGGGGAATCCCCAAAACTCCACGCGGATTTGCTTTGTGGATGTCCAATAACCtccttgttttggtcattctttaAGTCGATCGACTACATATCCGGGCAATCCGAAAGTCGATAATCGTAGTTTAGTGGAGAGGAGGTCGGCAAAATCAATTCTTGCAAAGCAATGGCGCAAAACGACAGCCAAGAGTTCGCGGAGCTCTGGGAGAAGAATTTGATAAGTATTCAGCCCCCAGGTGGTGGCTCTTGCTGGGACATCATTAATGAtgagGAGTACTTGCCGGGATCGTTTGACCccaatttttttgaaaatgtgcttGAAGAACAGCCTCAGCCATCCACTCTCCCACCAACATCCACTGTTCCGGAGACAAGCGACTATCCCGGCGATCATGGATTTAGGCTCAGGTTCCCGCAGTCTGGCACAGCAAAATCTGTAACTTGCACTtATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAGCTTGGTGCTGAATGGACAACTGTGCTACTAAACTACATGTGCAATAGCAGCTGCATGGGGGGGATGAACCGCAGGCCCATCCTCACAATCATCACTCTGGAGACTCAGGAAGGTCAGTTGCTGGGCCGGAGGTCTTTTgaggtgcgtgtgtgtgcatgtccaGGCAGAGACAGGAAAACTGAGGAGAGCAACTTCAAGAAAGACCAAGAGACCAAAACCATGGCCAAAACCACCACTGGGACCAAACGTAGTTTGGTGAAAGAATCTTCTTCAGCTACATTACGACCTGAGGGGAGCAAAAAGGCCAAGGGCTCCAGCAGCGATGAGGAGATCTTTACCCTGCAGGTGAGGGGCAGGGAGCGTTATGAAATTTTAAAGAAATTGAACGACAGTCTGGAGTTAAGTGATGTGGTGCCTGCCTCAGATGCTGAAAAGTATCGTCAGAAATTcatgacaaaaaacaaaaaagagaatCGTGAATCATCTGAGCCCAAACAGGGAAAGAAGCTGATGGTGAAGGACGAAGGAAGAAGCGACTCTGATTAAGGTGATGGGATGCTAAGAGAGAAAGAAACTGGGAGTTTTGCTCTTTTTGGACTgccttttttgcttttattacaccaaaaaaaaaagcttgtcacAGGGGTCATTTGGGGAACTGCGATACATGTGATCCATTAGTCCTGTTTGTCATGTTTCTTCTTGTTCACTCCACTGGGACCTTTGTTGCTGGACACTGATTTTGCAGTGTTTTACCAGCACTGGCGAGGGCTAAGACTAGCCTGACGTTTTACAGACCCGTTAAATGAACGTTCAGGAACGAAGTTTACCTGTGACTTttgtaaattgtaataatgcCAGTATTCGGTTGTTTTgtaagcagcatttttttttatttttataaagaaatGAGTATTAGACTAATTGGAACAAACCATCGGAATTGGTTGCAAGCCGATTATGTAATAAAAATACCAAAGCAAAACCGTTTTGTatcttatatttttttatgttaattactGCTGTTCCTATTTTTGTATTTTAGCTAATAAGAGAAGCTGCCCTTTATAACACGCTTTTAGATTTAGTACAACCATTGTTCTTTTTCAATTGAAGTAGTTGTTGATTTACTCTTGTGATTGTTGTTGAGTAATGTGGCACAGATAAGCTCATAAGTGGCCAGTCTGTTTTGACATGTGCTTGTGCAAATGGTTATGGATTGGATGTCTAAATATGAGCAAATGAAATGTCAAATACTCAGGGCATGTACAAGTCCCTCCTGGAAATCTTGATAAAACTCTTCTACTGTTTTACCTGCTATAGATTTTATGCTGGTTTTGTTTCTTATTACTGTTTACACGCATTTgccttttataaatatataagcgTGCATTTATTTGTAGCTAGCtgaatcatttataatttttctttttaagagaaatgttttaaaatacactcttt
>TCONS_00058801
CTGTAACTAGGGGAATCCCCAAAACTCCACGCGGATTTGCTTTGTGGATGTCCAATAACCtccttgttttggtcattctttaAGTCGATCGACTACATATCCGGGCAATCCGAAAGTCGATAATCGTAGTTTAGTGGAGAGGAGGTCGGCAAAATCAATTCTTGCAAAGCAATGGCGCAAAACGACAGCCAAGAGTTCGCGGAGCTCTGGGAGAAGAATTTGATTATTCAGCCCCCAGGTGGTGGCTCTTGCTGGGACATCATTAATGAtgagGAGTACTTGCCGGGATCGTTTGACCccaatttttttgaaaatgtgcttGAAGAACAGCCTCAGCCATCCACTCTCCCACCAACATCCACTGTTCCGGAGACAAGCGACTATCCCGGCGATCATGGATTTAGGCTCAGGTTCCCGCAGTCTGGCACAGCAAAATCTGTAACTTGCACTtATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAGCTTGGTGCTGAATGGACAACTGTGCTACTAAACTACATGTGCAATAGCAGCTGCATGGGGGGGATGAACCGCAGGCCCATCCTCACAATCATCACTCTGGAGACTCAGGAAGGTCAGTTGCTGGGCCGGAGGTCTTTTgaggtgcgtgtgtgtgcatgtccaGGCAGAGACAGGAAAACTGAGGAGAGCAACTTCAAGAAAGACCAAGAGACCAAAACCATGGCCAAAACCACCACTGGGACCAAACGTAAATCTTCTTCAGCTACATTACGACCTGAGGGGAGCAAAAAGGCCAAGGGCTCCAGCAGCGATGAGGAGATCTTTACCCTGCAGGTGAGGGGCAGGGAGCGTTATGAAATTTTAAAGAAATTGAACGACAGTCTGGAGTTAAGTGATGTGGTGCCTGCCTCAGATGCTGAAAAGTATCGTCAGAAATTcatgacaaaaaacaaaaaagagaatCGTGAATCATCTGAGCCCAAACAGGGAAAGAAGCTGATGGTGAAGGACGAAGGAAGAAGCGACTCTGATTAAGGTGATGGGATGCTAAGAGAGAAAGAAACTGGGAGTTTTGCTCTTTTTGGACTgccttttttgcttttattacaccaaaaaaaaaagcttgtcacAGGGGTCATTTGGGGAACTGCGATACATGTGATCCATTAGTCCTGTTTGTCATGTTTCTTCTTGTTCACTCCACTGGGACCTTTGTTGCTGGACACTGATTTTGCAGTGTTTTACCAGCACTGGCGAGGGCTAAGACTAGCCTGACGTTTTACAGACCCGTTAAATGAACGTTCAGGAACGAAGTTTACCTGTGACTTttgtaaattgtaataatgcCAGTATTCGGTTGTTTTgtaagcagcatttttttttatttttataaagaaatGAGTATTAGACTAATTGGAACAAACCATCGGAATTGGTTGCAAGCCGATTATGTAATAAAAATACCAAAGCAAAACCGTTTTGTatcttatatttttttatgttaattactGCTGTTCCTATTTTTGTATTTTAGCTAATAAGAGAAGCTGCCCTTTATAACACGCTTTTAGATTTAGTACAACCATTGTTCTTTTTCAATTGAAGTAGTTGTTGATTTACTCTTGTGATTGTTGTTGAGTAATGTGGCACAGATAAGCTCATAAGTGGCCAGTCTGTTTTGACATGTGCTTGTGCAAATGGTTATGGATTGGATGTCTAAATATGAGCAAATGAAATGTCAAATACTCAGGGCATGTACAAGTCCCTCCTGGAAATCTTGATAAAACTCTTCTACTGTTTTACCTGCTATAGATTTTATGCTGGTTTTGTTTCTTATTACTGTTTACACGCATTTgccttttataaatatataagcgTGCATTTATTTGTAGCTAGCtgaatcatttataatttttctttttaagagaaatgttttaaaatacactctttaaaaaaaa
>TCONS_00058802
GCAACATCATTGGACCGCTTGTGTGTTGTATTATTGTAACAAACTGACGTCGATTCGATAAAAACTGCAATGGCGCAAAACGACAGCCAAGAGTTCGCGGAGCTCTGGGAGAAGAATTTGATTATTCAGCCCCCAGGTGGTGGCTCTTGCTGGGACATCATTAATGAtgagGAGTACTTGCCGGGATCGTTTGACCccaatttttttgaaaatgtgcttGAAGAACAGCCTCAGCCATCCACTCTCCCACCAACATCCACTGTTCCGGAGACAAGCGACTATCCCGGCGATCATGGATTTAGGCTCAGGTTCCCGCAGTCTGGCACAGCAAAATCTGTAACTTGCACTtATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAG
>TCONS_00058803
TGAAACTCGTATTTCGAACTTTAGGCCCGACATCGCTTTAAACGTTACTAAAACGTTGATGTTAACGTTAGCCGCTAAGCCTGTTAGCTAGCTAACATTAGCTGTCGAAAATGCAAACTTAGAGTTTCAGTATAATAGCTTTAGGTGACTTTTAGAAATCTTATGTACAGCAATGGCGCAAAACGACAGCCAAGAGTTCGCGGAGCTCTGGGAGAAGAATTTGATTATTCAGCCCCCAGGTGGTGGCTCTTGCTGGGACATCATTAATGAtgagGAGTACTTGCCGGGATCGTTTGACCccaatttttttgaaaatgtgcttGAAGAACAGCCTCAGCCATCCACTCTCCCACCAACATCCACTGTTCCGGAGACAAGCGACTATCCCGGCGATCATGGATTTAGGCTCAGGTTCCCGCAGTCTGGCACAGCAAAATCTGTAACTTGCACTtATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAG
>TCONS_00058804
ATGGCGCAAAACGACAGCCAAGAGTTCGCGGAGCTCTGGGAGAAGAATTTGATTATTCAGCCCCCAGGTGGTGGCTCTTGCTGGGACATCATTAATGAtgagGAGTACTTGCCGGGATCGTTTGACCccaatttttttgaaaatgtgcttGAAGAACAGCCTCAGCCATCCACTCTCCCACCAACATCCACTGTTCCGGAGACAAGCGACTATCCCGGCGATCATGGATTTAGGCTCAGGTTCCCGCAGTCTGGCACAGCAAAATCTGTAACTTGCACTtATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAGCTTGGTGCTGAATGGACAACTGTGCTACTAAACTACATGTGCAATAGCAGCTGCATGGGGGGGATGAACCGCAGGCCCATCCTCACAATCATCACTCTGGAGACTCAGGAAGGTCAGTTGCTGGGCCGGAGGTCTTTTgaggtgcgtgtgtgtgcatgtccaGGCAGAGACAGGAAAACTGAGGAGAGCAACTTCAAGAAAGACCAAGAGACCAAAACCATGGCCAAAACCACCACTGGGACCAAACGTAGTAAGTTTGCTGCTACACTGCTGAAAAATATTTTGCCTTATAATAGGAGGGTAATGTGAATCTAACCTGGCAGGTTTGGTGAAAGAATCTTCTTCAGCTACATTACGACCTGAGGGGAGCAAAAAGGCCAAGGGCTCCAGCAGCGATGAGGAGATCTTTACCCTGCAGGTGAGGGGCAGGGAGCGTTATGAAATTTTAAAGAAATTGAACGACAGTCTGGAGTTAAGTGATGTGGTGCCTGCCTCAGATGCTGAAAAGTATCGTCAGAAATTcatgacaaaaaacaaaaaagagaatCGTGAATCATCTGAGCCCAAACAGGGAAAGAAGCTGATGGTGAAGGACGAAGGAAGAAGCGACTCTGATTAA
>TCONS_00058805
AGAACAGAGATGTGTTTCGCATTTTTAAAATATCCTGGCGAACATTTGGAGGGAGATGTTGgtctttttatgcattttttaggATGGAGTGTAATACATTTTAGGATTGTTAATAGTGCTGGACAGTCAAGCTGGTGCTTCACATTCTGTGTGACATTACAAGACCAGGAGGtATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAGCTTGGTGCTGAATGGACAACTGTGCTACTAAACTACATGTGCAATAGCAGCTGCATGGGGGGGATGAACCGCAGGCCCATCCTCACAATCATCACTCTGGAGACTCAGGAAGGTCAGTTGCTGGGCCGGAGGTCTTTTgaggtgcgtgtgtgtgcatgtccaGGCAGAGACAGGAAAACTGAGGAGAGCAACTTCAAGAAAGACCAAGAGACCAAAACCATGGCCAAAACCACCACTGGGACCAAACGTAAATCTTCTTCAGCTACATTACGACCTGAGGGGAGCAAAAAGGCCAAGGGCTCCAGCAGCGATGAGGAGATCTTTACCCTGCAG
>TCONS_00058806
TGTGTTTCGCATTTTTAAAATATCCTGGCGAACATTTGGAGGGAGATGTTGgtctttttatgcattttttaggATGGAGTGTAATACATTTTAGGATTGTTAATAGTGCTGGACAGTCAAGCTGGTGCTTCACATTCTGTGTGACATTACAAGACCAGGAGGGTAAGACATTTGAAAAGACATTTAAAAGGCTTGaattATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCTCCGTGGTTCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATaACTTGGCGCCTGCTGGTCATTTGATAAGAGTGGAGGGCAATCAGCGAGCAAATTACAGGGAAGATAACATCACTTTAAGGCATAGTGTTTTTGTCCCATATGAAGCACCACAGCTTGGTGCTGAATGGACAACTGTGCTACTAAACTACATGTGCAATAGCAGCTGCATGGGGGGGATGAACCGCAGGCCCATCCTCACAATCATCACTCTGGAGACTCAGGAAGGTCAGTTGCTGGGCCGGAGGTCTTTTgaggtgcgtgtgtgtgcatgtccaGGCAGAGACAGGAAAACTGAGGAGAGCAACTTCAAGAAAGACCAAGAGACCAAAACCATGGCCAAAACCACCACTGGGACCAAACGTAGTTTGGTGAAAGAATCTTCTTCAGCTACATTACGACCTGAGGGGAGCAAAAAGGCCAAGGGCTCCAGCAGCGATGAGGAGATCTTTACCCTGCAGGTGAGGGGCAGGGAGCGTTATGAAATTTTAAAGAAATTGAACGACAGTCTGGAGTTAAGTGATGTGGTGCCTGCCTCAGATGCTGAAAAGTATCGTCAGAAATTcatgacaaaaaacaaaaaagagaatCGTGAATCATCTGAGCCCAAACAGGGAAAGAAGCTGATGGTGAAGGACGAAGGAAGAAGCGACTCTGATTAAGGTGATGGGATGCTAAGAGAGAAAGAAACTGGGAGTTTTGCTCTTTTTGGACTgccttttttgcttttattacaccaaaaaaaaaagcttgtcacAGGGGTCATTTGGGGAACTGCGATACATGTGATCCATTAGTCCTGTTTGTCATGTTTCTTCTTGTTCACTCCACTGGGACCTTTGTTGCTGGACACTGATTTTGCAGTGTTTTACCAGCACTGGCGAGGGCTAAGACTAGCCTGACGTTTTACAGACCCGTTAAATGAACGTTCAGGAACGAAGTTTACCTGTGACTTttgtaaattgtaataatgcCAGTATTCGGTTGTTTTgtaagcagcatttttttttatttttataaagaaatGAGTATTAGACTAATTGGAACAAACCATCGGAATTGGTTGCAAGCCGATTATGTAATAAAAATACCAAAGCAAAACCGTTTTGTatcttatatttttttatgttaattactGCTGTTCCTATTTTTGTATTTTAGCTAATAAGAGAAGCTGCCCTTTATAACACGCTTTTAGATTTAGTACAACCATTGTTCTTTTTCAATTGAAGTAGTTGTTGATTTACTCTTGTGATTGTTGTTGAGTAATGTGGCACAGATAAGCTCATAAGTGGCCAGTCTGTTTTGACATGTGCTTGTGCAAATGGTTATGGATTGGATGTCTAAATATGAGCAAATGAAATGTCAAATACTCAGGGCATGTACAAGTCCCTCCTGGAAATCTTGATAAAACTCTTCTACTGTTTTACCTGCTATAGATTTTATGCTGGTTTTGTTTCTTATTACTGTTTACACGCATTTgccttttataaatatataagcgTGCATTTATTTGTAGCTAGCtgaatcatttataatttttctttttaagagaaatgttttaaaatacactcttt

Function

symbol description
tp53 Enables DNA-binding transcription factor activity; identical protein binding activity; and sequence-specific DNA binding activity. Involved in regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including hemopoiesis; intracellular signal transduction; and regulation of nucleobase-containing compound metabolic process. Located in chromatin. Is expressed in several structures, including digestive system; head; musculature system; nervous system; and reproductive system. Used to study Li-Fraumeni syndrome; aggressive NK-cell leukemia; angiosarcoma; and cancer. Human ortholog(s) of this gene implicated in several diseases, including Li-Fraumeni syndrome (multiple); carcinoma (multiple); hematologic cancer (multiple); open-angle glaucoma (multiple); and pancreatic cancer (multiple). Orthologous to human TP53 (tumor protein p53).

GO:

id name namespace
GO:0048730 epidermis morphogenesis biological_process
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0006914 autophagy biological_process
GO:0006915 apoptotic process biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0000077 DNA damage checkpoint biological_process
GO:0045786 negative regulation of cell cycle biological_process
GO:0045787 positive regulation of cell cycle biological_process
GO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator biological_process
GO:0048821 erythrocyte development biological_process
GO:0007283 spermatogenesis biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0010165 response to X-ray biological_process
GO:0051782 negative regulation of cell division biological_process
GO:2000779 regulation of double-strand break repair biological_process
GO:0061484 hematopoietic stem cell homeostasis biological_process
GO:0016525 negative regulation of angiogenesis biological_process
GO:0051262 protein tetramerization biological_process
GO:0060729 intestinal epithelial structure maintenance biological_process
GO:0007049 cell cycle biological_process
GO:0060216 definitive hemopoiesis biological_process
GO:0009411 response to UV biological_process
GO:0031647 regulation of protein stability biological_process
GO:0097193 intrinsic apoptotic signaling pathway biological_process
GO:0090398 cellular senescence biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0071456 cellular response to hypoxia biological_process
GO:0051597 response to methylmercury biological_process
GO:0010526 negative regulation of transposition, RNA-mediated biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0043525 positive regulation of neuron apoptotic process biological_process
GO:1902262 apoptotic process involved in blood vessel morphogenesis biological_process
GO:0043249 erythrocyte maturation biological_process
GO:0000785 chromatin cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0005515 protein binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0042802 identical protein binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:1990841 promoter-specific chromatin binding molecular_function

KEGG:

id description
ko04010 MAPK signaling pathway
ko04310 Wnt signaling pathway
ko04071 Sphingolipid signaling pathway
ko04151 PI3K-Akt signaling pathway
ko04137 Mitophagy - animal
ko04110 Cell cycle
ko04210 Apoptosis
ko04216 Ferroptosis
ko04115 p53 signaling pathway
ko04218 Cellular senescence
ko04919 Thyroid hormone signaling pathway
ko04722 Neurotrophin signaling pathway
ko04211 Longevity regulating pathway
ko05200 Pathways in cancer
ko05202 Transcriptional misregulation in cancer
ko05206 MicroRNAs in cancer
ko05205 Proteoglycans in cancer
ko05203 Viral carcinogenesis
ko05230 Central carbon metabolism in cancer
ko05210 Colorectal cancer
ko05212 Pancreatic cancer
ko05225 Hepatocellular carcinoma
ko05226 Gastric cancer
ko05214 Glioma
ko05216 Thyroid cancer
ko05220 Chronic myeloid leukemia
ko05217 Basal cell carcinoma
ko05218 Melanoma
ko05219 Bladder cancer
ko05215 Prostate cancer
ko05213 Endometrial cancer
ko05224 Breast cancer
ko05222 Small cell lung cancer
ko05223 Non-small cell lung cancer
ko05166 Human T-cell leukemia virus 1 infection
ko05161 Hepatitis B
ko05160 Hepatitis C
ko05162 Measles
ko05168 Herpes simplex virus 1 infection
ko05163 Human cytomegalovirus infection
ko05167 Kaposi sarcoma-associated herpesvirus infection
ko05169 Epstein-Barr virus infection
ko05165 Human papillomavirus infection
ko05131 Shigellosis
ko05012 Parkinson disease
ko05014 Amyotrophic lateral sclerosis
ko05016 Huntington disease
ko05417 Lipid and atherosclerosis
ko05418 Fluid shear stress and atherosclerosis
ko01524 Platinum drug resistance
ko01522 Endocrine resistance
ko03000 Transcription factors
ko03036 Chromosome and associated proteins
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-990415-270 Enables DNA-binding transcription factor activity; identical protein binding activity; and sequence-specific DNA binding activity. Involved in regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including hemopoiesis; intracellular signal transduction; and regulation of nucleobase-containing compound metabolic process. Located in chromatin. Is expressed in several structures, including digestive system; head; musculature system; nervous system; and reproductive system. Used to study Li-Fraumeni syndrome; aggressive NK-cell leukemia; angiosarcoma; and cancer. Human ortholog(s) of this gene implicated in several diseases, including Li-Fraumeni syndrome (multiple); carcinoma (multiple); hematologic cancer (multiple); open-angle glaucoma (multiple); and pancreatic cancer (multiple). Orthologous to human TP53 (tumor protein p53).

Ensembl:

ensembl_id ENSDARG00000035559

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058800 False 2208 mRNA 0.43 11 24086227 24097797
TCONS_00058799 False 2211 mRNA 0.43 11 24086227 24097797
TCONS_00058801 False 2204 mRNA 0.43 11 24086227 24097805
TCONS_00058802 False 645 lncRNA 0.50 6 24086516 24091347
TCONS_00058803 False 748 processed_transcript 0.48 6 24086598 24091347
TCONS_00058804 False 1195 mRNA 0.49 9 24087035 24096882
TCONS_00058805 False 802 processed_transcript 0.49 6 24089324 24093867
TCONS_00058806 True 1956 mRNA 0.41 8 24089334 24097797

Neighbor

gene id symbol gene type direction distance location
XLOC_030057 NA coding upstream 1998 23901787 ~ 24084229 (+)
XLOC_030064 gps2 coding upstream 11689 24063046 ~ 24074538 (+)
XLOC_030063 gabarapa coding upstream 24421 24059598 ~ 24061806 (+)
XLOC_030062 ctdnep1a coding upstream 29431 24047292 ~ 24056796 (+)
XLOC_030060 AL928875.1 coding upstream 63793 23994038 ~ 24022434 (+)
XLOC_030066 si:ch211-114c12.2 coding downstream 31103 24128908 ~ 24135569 (+)
XLOC_030067 slc25a15b coding downstream 58365 24156170 ~ 24163572 (+)
XLOC_030068 mpdu1a coding downstream 81502 24179307 ~ 24185865 (+)
XLOC_030069 NA coding downstream 102860 24200665 ~ 24228356 (+)
XLOC_030070 atp6v1aa coding downstream 147877 24245682 ~ 24259992 (+)
XLOC_030061 NA non-coding upstream 75328 24008862 ~ 24010899 (+)
XLOC_030058 CR391924.1 non-coding upstream 175778 23910333 ~ 23910449 (+)
XLOC_030056 NA non-coding upstream 201056 23873557 ~ 23885171 (+)
XLOC_030055 NA non-coding upstream 260697 23822572 ~ 23825530 (+)
XLOC_030071 NA non-coding downstream 163745 24261550 ~ 24278326 (+)
XLOC_030074 NA non-coding downstream 242872 24340677 ~ 24450520 (+)
XLOC_030075 NA non-coding downstream 371666 24469471 ~ 24472076 (+)
XLOC_030078 NA non-coding downstream 718520 24816325 ~ 24835317 (+)

Expression


Co-expression Network