XLOC_030071


Basic Information

Item Value
gene id XLOC_030071
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 24261550 ~ 24278326 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061694
TTGTTATCGTTAGATGTAAAATTTCtggtgtctccaaaatgtgtttttaaagattaaattccaaagatcatttaaaaaatgtggaaatacTTAGATATTGTGAAATTTGCCCCACATCTTTTTTGTGTGTCTATGAAAATGAGCGGCTGTTTGCAATAATAGCCAGAGATGGCGGCGTCTTTGAACGCTATTGTGACACTAGAGTAACAAGAACTCAAGTGAATGTCAAGCAACGATGAACAAACGATGGAGACGAAGAGCAAAGCTTACGACATTACCAGGCATTTCTGAACGgTTTGCGGGAGTTTGAATGGGACATTGATATCACAGCTCATGATCATTACTGCGCAGACTCTGGCTCTAAATGTCCTCATCAACGTAGCGGCCATAATGGCTTCTACAGTGTAGGTGTCTAGTGTGATGTGACCTGCGCTGGGTTTATGAGGGAACATTATGTCCTCCTGTTGGACATGAAACCTGATCTGAAAAGGTGTGGCCACATCAAACACATTCACATCTGTCTGAACTATTGCACCGCCCTGACCATAACTTGACCCTCACCTCCAAATATGGCTGCTGAAGATCCATGTGTCAACTGCTGAGTATACATACAACCAAGTTTGGGCTGGAGGATTTATGAGCATTGAAAGTGATCTGATGACATGTGTACCGTTTAGAAGGACAGCGGCAGTCCAGGCTCTGCAGTAGAAGCTAGTATTTTGTTTCGGGATGGGATTGGGAACTCCAGCATGTTCACATTCACGAGGGACCACTAGCTGTCCCATCACGCAGCACCTGCGGACCACACGAAGGAAACTTAAGATGGCTGACTTGCAAAAATCTCGCTGGATGAGCAGTAGCACACCTGGTCGACTGCTTGAGAAAAGCTGAAATTAAAGTGCCAATGGTTCTGGAAAGTCATTAGTAGGGCTGTCATTCTCATTCATATTGCCTGCCTTGTGTAAAAaggtatactgtaaaaaatacagtattccgcacaattcattcatgttgcgaaaacacaaaatatttgagTTAAGTTTATTGGTTTTGACAATttaaagttgattgaacataaagcaatt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061694 True 1085 lncRNA 0.42 3 24261550 24278326

Neighbor

gene id symbol gene type direction distance location
XLOC_030070 atp6v1aa coding upstream 1558 24245682 ~ 24259992 (+)
XLOC_030069 NA coding upstream 33194 24200665 ~ 24228356 (+)
XLOC_030068 mpdu1a coding upstream 75685 24179307 ~ 24185865 (+)
XLOC_030067 slc25a15b coding upstream 97978 24156170 ~ 24163572 (+)
XLOC_030066 si:ch211-114c12.2 coding upstream 125981 24128908 ~ 24135569 (+)
XLOC_030072 zdhhc23a coding downstream 4244 24282570 ~ 24294160 (+)
XLOC_030073 ctsll coding downstream 27551 24305877 ~ 24309667 (+)
XLOC_030074 NA coding downstream 62351 24340677 ~ 24450520 (+)
XLOC_030075 NA coding downstream 191145 24469471 ~ 24472076 (+)
XLOC_030076 dgcr8 coding downstream 242111 24520437 ~ 24532386 (+)
XLOC_030057 NA non-coding upstream 177321 23901787 ~ 24084229 (+)
XLOC_030061 NA non-coding upstream 250651 24008862 ~ 24010899 (+)
XLOC_030058 CR391924.1 non-coding upstream 351101 23910333 ~ 23910449 (+)
XLOC_030056 NA non-coding upstream 376379 23873557 ~ 23885171 (+)
XLOC_030078 NA non-coding downstream 537999 24816325 ~ 24835317 (+)
XLOC_030079 NA non-coding downstream 595479 24873805 ~ 24879565 (+)
XLOC_030083 NA non-coding downstream 969872 25248198 ~ 25249676 (+)

Expression


Co-expression Network