Item | Value |
---|---|
gene id | XLOC_030092 |
gene name | cemip2 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007116.7 |
NCBI id | CM002889.2 |
chromosome length | 72500376 |
location | 25760112 ~ 25814650 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
cemip2 | Enables hyalurononglucosaminidase activity. Involved in heart development; hyaluronan catabolic process; and regulation of signal transduction. Acts upstream of or within several processes, including heart development; muscle attachment; and positive regulation of extracellular matrix assembly. Is integral component of plasma membrane. Is expressed in brain; cardiovascular system; fin bud; head mesenchyme; and otic vesicle. Orthologous to human CEMIP2 (cell migration inducing hyaluronidase 2). |
id | name | namespace |
---|---|---|
GO:1903670 | regulation of sprouting angiogenesis | biological_process |
GO:1900748 | positive regulation of vascular endothelial growth factor signaling pathway | biological_process |
GO:0003143 | embryonic heart tube morphogenesis | biological_process |
GO:0055008 | cardiac muscle tissue morphogenesis | biological_process |
GO:0060415 | muscle tissue morphogenesis | biological_process |
GO:0003190 | atrioventricular valve formation | biological_process |
GO:0030214 | hyaluronan catabolic process | biological_process |
GO:0003197 | endocardial cushion development | biological_process |
GO:0060974 | cell migration involved in heart formation | biological_process |
GO:0016203 | muscle attachment | biological_process |
GO:0001947 | heart looping | biological_process |
GO:1901203 | positive regulation of extracellular matrix assembly | biological_process |
GO:0003318 | cell migration to the midline involved in heart development | biological_process |
GO:0005887 | integral component of plasma membrane | cellular_component |
GO:0016020 | membrane | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
GO:0005509 | calcium ion binding | molecular_function |
GO:0004415 | hyalurononglucosaminidase activity | molecular_function |
id | description |
---|---|
ZDB-GENE-030131-2179 | Enables hyalurononglucosaminidase activity. Involved in heart development; hyaluronan catabolic process; and regulation of signal transduction. Acts upstream of or within several processes, including heart development; muscle attachment; and positive regulation of extracellular matrix assembly. Is integral component of plasma membrane. Is expressed in brain; cardiovascular system; fin bud; head mesenchyme; and otic vesicle. Orthologous to human CEMIP2 (cell migration inducing hyaluronidase 2). |
ensembl_id | ENSDARG00000061600 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00058842 | False | 6779 | mRNA | 0.44 | 23 | 25760112 | 25814650 |
TCONS_00058841 | False | 6698 | mRNA | 0.44 | 24 | 25760112 | 25814650 |
TCONS_00058843 | False | 6761 | mRNA | 0.44 | 23 | 25762271 | 25814650 |
TCONS_00058844 | False | 5343 | mRNA | 0.45 | 22 | 25765522 | 25813615 |
TCONS_00058845 | True | 286 | processed_transcript | 0.36 | 2 | 25811873 | 25812239 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_030091 | abhd17b | coding | upstream | 2534 | 25733774 ~ 25757578 (+) |
XLOC_030090 | NA | coding | upstream | 49680 | 25701025 ~ 25710432 (+) |
XLOC_030089 | zfand5a | coding | upstream | 65750 | 25680842 ~ 25694362 (+) |
XLOC_030088 | si:dkey-96l17.6 | coding | upstream | 154444 | 25596234 ~ 25605668 (+) |
XLOC_030087 | kifl | coding | upstream | 172499 | 25585869 ~ 25587613 (+) |
XLOC_030093 | trpm3 | coding | downstream | 130596 | 25945246 ~ 26063332 (+) |
XLOC_030094 | dre-mir-204-1 | coding | downstream | 157418 | 25972068 ~ 25972160 (+) |
XLOC_030095 | klf9 | coding | downstream | 260580 | 26075230 ~ 26078165 (+) |
XLOC_030096 | si:dkey-201c13.2 | coding | downstream | 264528 | 26079178 ~ 26083142 (+) |
XLOC_030097 | bco2l | coding | downstream | 306743 | 26121393 ~ 26130527 (+) |
XLOC_030085 | NA | non-coding | upstream | 445360 | 25311263 ~ 25314752 (+) |
XLOC_030083 | NA | non-coding | upstream | 510436 | 25248198 ~ 25249676 (+) |
XLOC_030079 | NA | non-coding | upstream | 880547 | 24873805 ~ 24879565 (+) |
XLOC_030078 | NA | non-coding | upstream | 924795 | 24816325 ~ 24835317 (+) |
XLOC_030106 | NA | non-coding | downstream | 665024 | 26479674 ~ 26481301 (+) |
XLOC_030114 | NA | non-coding | downstream | 1081384 | 26896034 ~ 26906786 (+) |
XLOC_030117 | NA | non-coding | downstream | 1135061 | 26949711 ~ 27051459 (+) |
XLOC_030118 | NA | non-coding | downstream | 1261353 | 27076003 ~ 27091304 (+) |