XLOC_030108 (tmem150aa)


Basic Information

Item Value
gene id XLOC_030108
gene name tmem150aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 26728115 ~ 26750510 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058868
ATCTTAAAGGAACAACCAAGGTTGAGTGAGGTTGGAAGCAGGGAGTAGCAGGACTTAAGGCCTGGATTTGGCGGCCGGAAGGAAGGAGCAAGCGTGGCATCCCTCTCCTCCTCTCATGTCCCCTCCCTGTGTGTCCTTGCATGTCAGTGCCCCCTCGTCATCCCCCCCGTGTCTCACCCCGCCAGCCCTCTGTGTTCCTCCCCCTCATGCTTGGGACAGACCGGCCCCACCGTCAGACCAATGACTGCCTGGATCATACTGCCTGTCAGCCTGGCTGCCTTCTCCATCACTGGCATATGGATAGTATATGCTATGGCTGTAATGAACCACCATGTTTGTCCTGTCGAAAACTGGTCATACAATGTGACGTGCACAGAAGAAACAGCCAAACCGGGCTTCCCAAAAACATGCTGCACCCTTCAAGACATCCCCCTCATCAGTAAATGTGGATCCTACCCTCCCGAGAGCTGTCTGTTCAGTCTTATCGGTAATGTGGGAGCTTTTATGGtgGTGATGGTGTGTTTACTACGGTATGCTCAGATCATCGAGCACAGGAACCACTGCTGGCTCAACACCAGTGGACTTGTGTCCGGATGCACCAATGCTGTGGGACTCGTCATGGTGGGCAACTTCCAGGTGGACCACGCTAAAAAACTTCACTATGTGGGTGCAGGCGCCGCCTTTCCTGCCGGAATTCTGTTCGTGTGTTTGCAGTGTTTGCTGACCTACAGGGTGGCTGTCACAGCTCTGGACTACTGGATGGCTCATGTGCGCGTGGCTCTGGCTACTGGAGCTCTCATCACACTGGTTCTCAGTGGGATATTCTTCATCCACGAGAGCTTCGTCTTACAGCATGCAGCAGCCATCTGCGAATGGGTCTTCACAGTGGTCATCCTCATCTTCTACGGGACTTTTACCTACGAGTTTGGAACTGTAACAACAGAGACCATGTTGGCCGGCCTCCAGCGGAACCTATCGCATGGGCCCGGCGTCATGATCGGAGACGATGTCCAAGCTGGCACCCTGGGAAGCAGTACCACAACAAAGAGTTTGAAATCTCCAGGGGGAAGCAGCACCTCCACCCATCTGAACTGCACTCCTGAGAACATAGCAATGCtttaaacacagcacacacacagtcacatacTGCCACGTGAGAGGCCGTCTCACGATGGTGCTCCCACACAGAAATCAAACTGATTTAGGGGACGTTTACATGACACATTTTTC

Function

symbol description
tmem150aa Predicted to be involved in protein localization to plasma membrane. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human TMEM150A (transmembrane protein 150A).

GO:

id name namespace
GO:0010506 regulation of autophagy biological_process
GO:0005764 lysosome cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060825-321 Predicted to be involved in protein localization to plasma membrane. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human TMEM150A (transmembrane protein 150A).

Ensembl:

ensembl_id ENSDARG00000068227

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058868 True 1230 mRNA 0.53 8 26728115 26750510

Neighbor

gene id symbol gene type direction distance location
XLOC_030107 tango2 coding upstream 1895 26686279 ~ 26726220 (+)
XLOC_030106 NA coding upstream 246814 26479674 ~ 26481301 (+)
XLOC_030105 si:ch211-214j8.1 coding upstream 466990 26248380 ~ 26261125 (+)
XLOC_030104 gtf2h2 coding upstream 495047 26221011 ~ 26233068 (+)
XLOC_030103 oclnb coding upstream 507244 26212621 ~ 26220871 (+)
XLOC_030109 si:ch211-102c2.8 coding downstream 14731 26765241 ~ 26771984 (+)
XLOC_030110 si:ch211-102c2.8 coding downstream 25928 26776438 ~ 26783854 (+)
XLOC_030111 tcn2 coding downstream 44955 26795465 ~ 26828380 (+)
XLOC_030112 imp4 coding downstream 96680 26847190 ~ 26852040 (+)
XLOC_030113 araf coding downstream 105743 26856253 ~ 26869392 (+)
XLOC_030094 dre-mir-204-1 non-coding upstream 755955 25972068 ~ 25972160 (+)
XLOC_030090 NA non-coding upstream 1017683 25701025 ~ 25710432 (+)
XLOC_030085 NA non-coding upstream 1413363 25311263 ~ 25314752 (+)
XLOC_030083 NA non-coding upstream 1478439 25248198 ~ 25249676 (+)
XLOC_030114 NA non-coding downstream 145524 26896034 ~ 26906786 (+)
XLOC_030117 NA non-coding downstream 199201 26949711 ~ 27051459 (+)
XLOC_030118 NA non-coding downstream 325493 27076003 ~ 27091304 (+)
XLOC_030126 NA non-coding downstream 903740 27654250 ~ 27654718 (+)
XLOC_030132 NA non-coding downstream 1531659 28282169 ~ 28292411 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000339_03754850_03760019 TMEM150AA coding CI01000339 null 3754850 ~ 3760086 (+)