XLOC_030188 (uap1l1)


Basic Information

Item Value
gene id XLOC_030188
gene name uap1l1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 31811662 ~ 31817395 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059024
AGGGGAGTTGCCGAATGACTTGAGTACACACTAAATACGCTtttacagtagttttttttttcttatttgcccAGTTATATGTAACTCCGGCTATGTTTATTGTACCAACAACCGCACAGTGATCACGAGTTTCAGGCTGTTGAAAACAGGACCTGGATCAGCACTAATATCAGCTCGACTCCTATCACTACTGTGTTGAGCAGCTTCTAGCAGAGAAAGATGTCCTTTGAGGAAGCTAAAGCGAAATTAGAAGCAGCAGGACAGACTCATGTTTTACAGTTCTGGGATGAACTTTCTGCGGAAGAAAGGGGCACATTTCTGGAGGAAATTTTTCAGCTGCAGCCCGACGAGTTAGTCGAGCACTGCCGAGAAGCTGCAGCGTCCGCAAGCCGACAATCGAGTGCCGATGGTCGGCTTGACGCGCGGATGCAGCCCGTTCCTCCAGAGTTCATTGGGAGTGTGCGTAAAAGTGACAGAGAAACCCTTCAGAAGTGGGAGAATGAAGGGCTACTGCAGATTTCACAGGACAGAGTGGCTGTTTTGCTGTTAGCTGGTGGTCAGGGGACTCGTCTTGGAGTATCTTATCCCAAGGGCATGTATAATGTTGGGCTTCCAAGTGGGAAAACCCTGTACCAAATTCAGGCAGAGAGGATCCAGAAAGTACAAGAGCTGGCCAATGTGAGGCATGGCAGTAGGTGCACAATACCATGGTTCATAATGACCAGTGAGTTCACCCTGGGACCCACAGAGAAGTTCTtcaaagacaacaaatattttggcCTTTGTCCATCCAATGTGGTCATGTTTGAACAGAGGATGATACCAGCTGTGGGCTTTGATGGAAAGATCATCCtggagaagaaaaacaaaatagccATGGCTCCAGATGGAAATGGCGGCCTCTATCGGTCACTGGTGGACAACAAGATTTTAGAGGACATGGAGAGAAGGAATGTGGAGTTTCTTCACGTGTACTGTGTGGACAACATCTTGGTGAAGATGGCAGACCCGGTTTTTATTGGCTTTTGTGTAACCAACGGAGCAGACTGTGGTGCCAAGGTGGTGGAAAAGGCCTATCCTGCAGAGCCTGTTGGAGTGGTGTGCCGTGTGGACGGTGTATATCAGGTGATTGAGTACAGTGAGATCCAGCCAGAGACGGCAGAGCTGCGAGGCTCAGGAGGAGAGCTTGTGTTCAGTGCCGGGAACATTTGCAATCACTTCTTTACCCGGAGCTTCTTGAGGGACGTGGCAGAAAAGTTTGAGAGTAAGCTGAAGCAGCATGTGGCAATCAAGAAAGTGCCGTTTGTGGATGGAGAAGGAAACCTGGTGAAACCAACAAAGCCCAATGGCATCAAAATGGAGAAATTTGTATTTGACGTCTTTCAGTTCTCAAAGAAATTTGTCGCATTTGAGGTGTTGAGGGAAGAGGAATTTTCACCCCTGAAAAATGCTGATGGGGCACCTCTGGACACACCAACCACAGCACGCCGATCTTTGCTAGCACAACATTACCGCTGGATTCTGGCAGCCGGTGGAAGCTTCCTTGATGAGCAAAATAAGCCCTTCACACCAAAACATAGTACTGCGCAGAATGAAGACCCACCAGCTGTCTGTGAAATCTCTCCACTCGTATCATACTTTGGCGAGGGTCTGGAAATGCTGCTAAATCAGAAGAACTTGAAGTCGCCTTTTATACTTGATGAGAATGAAGCCAAAAATCTTGTGCAAACAGTATAATGTTTTTAGCTGAGGATTATGCATGGTAGATTTTTGACAGTAAAGGAAATTAAAGGGATGTTTGCAAatcaacaataaatacataaactagTTA
>TCONS_00059025
CTTGGTGAAGATGGCAGACCCGGTTTTTATTGGCTTTTGTGTAACCAACGGAGCAGACTGTGGTGCCAAGGTGGTGGAAAAGGCCTATCCTGCAGAGCCTGTTGGAGTGGTGTGCCGTGTGGACGGTGTATATCAGGTGATTGAGTACAGTGAGATCCAGCCAGAGACGGCAGAGCTGCGAGGCTCAGGAGGAGAGCTTGTGTTCAGTGCCGGGAACATTTGCAATCACTTCTTTACCCGGAGCTTCTTGAGGGACGTGGCAGAAAAGTTTGAGAGTAAGCTGAAGCAGCATGTGGCAATCAAGAAAGTGCCGTTTGTGGATGGAGAAGGAAACCTGGTGAAACCAACAAAGCCCAATGGCATCAAAATGGAGAAATTTGTATTTGACGTCTTTCAGTTCTCAAAGTGTGTTTGCAGCTATTCTTAATTTGGGCAAAATCAGGTATCACCCTCTTCTTCACtgtaatttgttttgtctttgcaaGGAAATTTGTCGCATTTGAGGTGTTGAGGGAAGAGGAATTTTCACCCCTGAAAAATGCTGATGGGGCACCTCTGGACACACCAACCACAGCACGCCGATCTTTGCTAGCACAACATTACCGCTGGATTCTGGCAGCCGGTGGAAGCTTCCTTGATGAGCAAAATAAGCCCTTCACACCAAAACATAGTACTGCGCAGAATGAAGACCCACCAGCTGTCTGTGAAATCTCTCCACTCGTATCATACTTTGGCGAG

Function

symbol description
uap1l1 Predicted to enable UDP-N-acetylglucosamine diphosphorylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Is expressed in mucus secreting cell. Orthologous to human UAP1L1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1).

GO:

id name namespace
GO:0006048 UDP-N-acetylglucosamine biosynthetic process biological_process
GO:0016740 transferase activity molecular_function
GO:0016779 nucleotidyltransferase activity molecular_function
GO:0070569 uridylyltransferase activity molecular_function
GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1056 Predicted to enable UDP-N-acetylglucosamine diphosphorylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Is expressed in mucus secreting cell. Orthologous to human UAP1L1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1).

Ensembl:

ensembl_id ENSDARG00000013082

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059024 False 1831 mRNA 0.46 9 31811662 31817395
TCONS_00059025 True 738 lncRNA 0.48 4 31813336 31816836

Neighbor

gene id symbol gene type direction distance location
XLOC_030187 slc25a25b coding upstream 5049 31779911 ~ 31806613 (+)
XLOC_030186 si:dkey-220k22.3 coding upstream 203953 31605322 ~ 31607709 (+)
XLOC_030184 si:dkey-220k22.1 coding upstream 220662 31480342 ~ 31591000 (+)
XLOC_030185 CR759893.1 coding upstream 262875 31548312 ~ 31548787 (+)
XLOC_030183 camkk1a coding upstream 378935 31283576 ~ 31432727 (+)
XLOC_030189 zdhhc12b coding downstream 2041 31819436 ~ 31826573 (+)
XLOC_030190 iscub coding downstream 42648 31860043 ~ 31868847 (+)
XLOC_030191 NA coding downstream 87452 31904847 ~ 31912078 (+)
XLOC_030192 NA coding downstream 93608 31911003 ~ 31918136 (+)
XLOC_030193 ungb coding downstream 126875 31944270 ~ 31952788 (+)
XLOC_030177 NA non-coding upstream 837583 30780430 ~ 30974079 (+)
XLOC_030178 NA non-coding upstream 857141 30952223 ~ 30954521 (+)
XLOC_030174 BX276103.2 non-coding upstream 1084014 30723129 ~ 30727648 (+)
XLOC_030164 BX897688.1 non-coding upstream 1645090 30166456 ~ 30166572 (+)
XLOC_030198 NA non-coding downstream 266334 32083729 ~ 32086577 (+)
XLOC_030204 NA non-coding downstream 442768 32260163 ~ 32264060 (+)
XLOC_030206 NA non-coding downstream 541485 32358880 ~ 32367481 (+)

Expression


Co-expression Network