LOC110487266


Basic Information

Item Value
gene id LOC110487266
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 12416017 ~ 12448563 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110487266
ATGAGTaatggggttcaggtggggccagtctcccaggtagtggaggagatgtccaCTATGAGTaatggggttcaggtggggctagtctcccaggtagtggaggagatgtccaCTATGAGTaatggggttcaggtgacggtggggttagaccagctgaGTGTGAAGAAGCGTTTCCATTTGAGGAAATGTGTTACTGCTGTCACGGCAGCAAAGGGTAATGGGAAACGTGTACACAGCAAACTCACTTGGATTACATTGGCTTTGAGGCGAGCCTTGCATTTTGTTTTCAAAGTGGGTGACAGAAGCAAAACGGCCACATTTTTACCCAGATGTGCTCGGCATGAAGATTTGGCGTCACAATATTTGCGTTACAAAGAGTTTAAAGAAGGCATCTTGTAAGGGCCCTTATGATGGAAAATGGACCAAGACAATGGTCGGCTTTGGGCCAGAGGATGATGACTTTACGGCTGAACTGATCTACAATTATGGAGTAGGAGGATATCGCCTAGGCAATGACATCCTCGGTTTAACTCTGCAGTCTAGCCAGGCTGTCAGCAATGCTAAGCGGCTTGGTTGGCCCCTCACTGAGGTTGGAAAGGGCCTCTGGCTGAGGCCCCAGGAGGTTATCGCTTCTTCTGGACAAAGAACAGCCTCCCAATGATCCTGTACAGAAGGTGTGTCTGGCAGGGTCTGACCTGCAGAAATCAATACGCTGCTCCTCCCTTCTGGGGAtgaaggtgaaagagagaaatGAGGATAAGAAGACTGTGCTGATGGGATTCACAGACACTCCGTGTAAACTAGAGATTCACAACATTGTTGGGACTGTAGATCATGGGACAGCCTTCGAGTGGATAGCATTCTAGTGTCCATGTGAGCAGTTGGCAGATCGTGAACCCTTGATGACAAAGGGAAACCACAAAATCCTTACTCTCTTGGTTAGCCTGGAAACCCCTGGGAAGGCTACAGTTGAAGTGTTGTACAACCTGAGTGTGTACGGGGCCATGtacagggagaggagtgagagagtcaGTTGTCCGTGTGAGTTGCTGCGTGGAATGCTGATGAAGTAA

Function

NR:

description
PREDICTED: glyoxalase domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110487266 True 1073 mRNA 0.49 4 12416017 12448563

Neighbor

gene id symbol gene type direction distance location
LOC110485629 NA coding downstream 55687 12358008 ~ 12366285 (-)
LOC110485617 LOC106590349 coding downstream 477591 11906902 ~ 11938426 (-)
LOC110487235 xpnpep1 coding downstream 510234 11892173 ~ 11905783 (-)
LOC110485534 LOC106564462 coding downstream 540195 11873981 ~ 11875822 (-)
LOC110485539 cxcl12b coding downstream 604754 11797902 ~ 11811263 (-)
LOC110485637 LOC106590256 coding upstream 263121 12711684 ~ 12720418 (-)
LOC118938209 LOC106564503 coding upstream 273979 12722542 ~ 12744218 (-)
LOC110493438 LOC106564504 coding upstream 305623 12754186 ~ 12759727 (-)
LOC110485521 LOC106589832 coding upstream 423322 12871885 ~ 12878585 (-)
LOC110485520 LOC106590222 coding upstream 432385 12880948 ~ 12883307 (-)
G1144194 NA non-coding downstream 66988 12347792 ~ 12349029 (-)
G1144188 NA non-coding downstream 80457 12335334 ~ 12335560 (-)
G1144187 NA non-coding downstream 81027 12334765 ~ 12334990 (-)
G1144186 NA non-coding downstream 82294 12333121 ~ 12333723 (-)
G1144318 NA non-coding upstream 142918 12591481 ~ 12592128 (-)
G1144319 NA non-coding upstream 145053 12593616 ~ 12594366 (-)
G1144321 NA non-coding upstream 148277 12596840 ~ 12597109 (-)
G1144322 NA non-coding upstream 148772 12597335 ~ 12597693 (-)
G1144330 NA non-coding upstream 153773 12602336 ~ 12603302 (-)
G1143771 NA other downstream 334135 12043108 ~ 12081882 (-)
G1143743 NA other downstream 463449 11951595 ~ 11952568 (-)
LOC118938427 LOC106564452 other downstream 921677 11447021 ~ 11494371 (-)
G1144335 LOC106564512 other upstream 166413 12614976 ~ 12615559 (-)
G1144338 NA other upstream 169396 12617959 ~ 12618158 (-)
G1145035 NA other upstream 676307 13124870 ~ 13126598 (-)
LOC110485655 rab3d other upstream 716951 13163816 ~ 13178960 (-)
G1145046 LOC106589870 other upstream 844372 13292935 ~ 13294143 (-)

Expression


Co-expression Network