LOC118938214


Basic Information

Item Value
gene id LOC118938214
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 13505725 ~ 13509915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940324.1
AGAATTGTATAATGTCCGACTGTGGTTGTgttaactcaaatcaaatgttattcccTCAAAATAAAAAGCTGACCCTGAAAGGCTCTCAGTATTGCCCGAGTAGCGCTCGAGGCTAATGTTAGGTAGCTATTTTCCCGGGAAACAAACAGGCGCGCAATTTGACATTCCATCTCAAAATCAAAGGCTTATTTTTCTTACACGACGTTTGTAATCTGCAAATGGATGCCTTTTTCTTTGACAAGCTGCCTTCCACCTCACAATCAACTCCTAAACCCAGACATGAGACTACCCAGATGAATGTCTCCTGCTCCCAGGTGGACCCTGATGAAGGTCTTGGCACTGACCACGACTCAACCAGTGAGAGATCTTCATCCATGACCATGAGCACGGATGAGAGTCAGGAACATCAGATAATTTCCAGGATAGATGACATTGGCAAGAAGGTCCAGGACCTGGTTGGGAAGATAAACGACAGCCGCACCATGGACCAGACGATTATGGACAACTTTCAGGACAAGCTAGTGGAAAAGGTGGGTGAGATCTGCGGGCAGATGAAGGAGCACATGTACACTGTCTATGAGGAAAACAGCCATGCCATGCAGGCCACGCTCCGGGAGCTGACTCTGGTGCTGGAGAGCTGCAGTAAGCTCAACACTGAGCTCCACACCGTCTCCCAGGCCCTGGCAGGACTCAACAGGGGCCTGACTCTGCACCGGAGTACTGAgtgactacactcttagaaataaagggttccaaaggggttctttgcctgtccccataggagaacccttcttGGTTCCAGGTAGTATCCTTTTAGTTCCATGTAgtacccttttgggttccataaagaaccctttacacagagggttctacatggaaaccaaaaagggttctcctgtggggacagccgaagaacccttttggaacccttttttctaaatgTAGTTTGACAGCCTTTGGAAAGCCATTGATGACCCCACTGTACTGTGCCAGCCCCGTGCAGTGGTTGGTTATAGTATAACGGTGCTGGTTCAAGGGTTAACTAGCTGATTAAATATACCTGCTCTGTAGTTTTAAGTCTGGTGCTTTTGTAAGTGCTGTTTTGGTTAATAAACCTGAGTGTGTTGTTACAAA
>XM_036940323.1
AtgtatggtggaaaaacaattgctgccaggttttatgggtattaggTCTCATACTTTGGTACACTATTCAGAAGTAAAACAGGAAATGTTTTACTTCATTCACTACAGAATTTTACTTATAGATCTGCAAATGGATGCCTTTTTCTTTGACAAGCTGCCTTCCACCTCACAATCAACTCCTAAACCCAGACATGAGACTACCCAGATGAATGTCTCCTGCTCCCAGGTGGACCCTGATGAAGGTCTTGGCACTGACCACGACTCAACCAGTGAGAGATCTTCATCCATGACCATGAGCACGGATGAGAGTCAGGAACATCAGATAATTTCCAGGATAGATGACATTGGCAAGAAGGTCCAGGACCTGGTTGGGAAGATAAACGACAGCCGCACCATGGACCAGACGATTATGGACAACTTTCAGGACAAGCTAGTGGAAAAGGTGGGTGAGATCTGCGGGCAGATGAAGGAGCACATGTACACTGTCTATGAGGAAAACAGCCATGCCATGCAGGCCACGCTCCGGGAGCTGACTCTGGTGCTGGAGAGCTGCAGTAAGCTCAACACTGAGCTCCACACCGTCTCCCAGGCCCTGGCAGGACTCAACAGGGGCCTGACTCTGCACCGGAGTACTGAgtgactacactcttagaaataaagggttccaaaggggttctttgcctgtccccataggagaacccttcttGGTTCCAGGTAGTATCCTTTTAGTTCCATGTAgtacccttttgggttccataaagaaccctttacacagagggttctacatggaaaccaaaaagggttctcctgtggggacagccgaagaacccttttggaacccttttttctaaatgTAGTTTGACAGCCTTTGGAAAGCCATTGATGACCCCACTGTACTGTGCCAGCCCCGTGCAGTGGTTGGTTATAGTATAACGGTGCTGGTTCAAGGGTTAACTAGCTGATTAAATATACCTGCTCTGTAGTTTTAAGTCTGGTGCTTTTGTAAGTGCTGTTTTGGTTAATAAACCTGAGTGTGTTGTTACAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940324.1 False 1134 mRNA 0.47 5 13505725 13509771
XM_036940323.1 True 1046 mRNA 0.47 5 13505725 13509915

Neighbor

gene id symbol gene type direction distance location
LOC110485677 LOC106564572 coding downstream 11353 13471224 ~ 13494372 (-)
LOC110485679 LOC106564573 coding downstream 34744 13462989 ~ 13470981 (-)
LOC110485678 LOC106589534 coding downstream 47027 13439698 ~ 13458698 (-)
LOC110487278 LOC106589852 coding downstream 159358 13331515 ~ 13346367 (-)
LOC118938212 LOC106589906 coding downstream 243409 13210870 ~ 13262316 (-)
LOC110485686 LOC106589400 coding upstream 9429 13519344 ~ 13524700 (-)
LOC110485687 LOC106564530 coding upstream 16064 13525979 ~ 13542068 (-)
LOC110485683 LOC106589359 coding upstream 34727 13544642 ~ 13550664 (-)
LOC110485698 LOC106564568 coding upstream 90813 13600728 ~ 13614083 (-)
LOC100136256 LOC100136256 coding upstream 109859 13619768 ~ 13652557 (-)
G1145203 NA non-coding downstream 5065 13499483 ~ 13500660 (-)
G1145196 NA non-coding downstream 44265 13461254 ~ 13461460 (-)
G1145164 NA non-coding downstream 125608 13379914 ~ 13380117 (-)
G1145209 NA non-coding upstream 7525 13517440 ~ 13517732 (-)
G1145234 NA non-coding upstream 46154 13556069 ~ 13556290 (-)
G1145292 NA non-coding upstream 150643 13660558 ~ 13661218 (-)
G1145224 NA non-coding upstream 179213 13689128 ~ 13700548 (-)
G1145110 LOC106589620 other downstream 144917 13357074 ~ 13360808 (-)
G1145046 LOC106589870 other downstream 211582 13292935 ~ 13294143 (-)
LOC110485655 rab3d other downstream 334568 13163816 ~ 13178960 (-)
G1145035 NA other downstream 379127 13124870 ~ 13126598 (-)
G1144338 NA other downstream 887567 12617959 ~ 12618158 (-)
LOC110485696 LOC106564559 other upstream 153265 13657453 ~ 13665295 (-)
LOC110485704 NA other upstream 293651 13798679 ~ 13812239 (-)
G1145789 LOC106588930 other upstream 577037 14086952 ~ 14087567 (-)
G1145790 NA other upstream 579743 14089658 ~ 14090787 (-)
G1145830 LOC103354157 other upstream 667332 14177247 ~ 14180330 (-)

Expression


Co-expression Network