LOC110485694 (LOC106564562)


Basic Information

Item Value
gene id LOC110485694
gene name LOC106564562
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 13674650 ~ 13681639 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021556815.2
ATTCGGCGTAgcctacatttacattttatagCGTTCATGCCCTAATAATACTTGTGTACAGCTGGTGGCAGTAATACGTCTTGTGACAGTGAGTGACGTTCTTGAGGAGAAAGcctaccaaagaagaagaaaatggaaCCAGgaagtgcaagctagctaaccATCTGTCTTGTGTAATAGGTCTAGTTTTCATGTTACATTAAGATAAATATGACATTATATTAGGTAGATTTATATTGTAGAAATAAATGCCTTTGCTAATACAAAATAGAAGAATCGAACGACCAGGTTCGACAGTCGATTTGTTCGCCAGATATCCGCATTTGCAGGAAAACGCCCGAGTATTTCGGTCCATGCCGGTTGTAGATGTCGACCCGAAGTGCCTCCTATACATACAGCAACGAGAGTTTGCAGCCACAACACCAGCGGACAACTCTGTCGCTGTCCTTGGTTCTGATGATGCAACCACCTGCCACCTAGTTCTGGTACGACACACAGGAAGTGGAGCTGCTTGCCTTGCTCACTGTGATGGCTCCAGCACGTGGAGTGAGGTTCCCCTCATCGTCAAAGCTGTCACATCTCTGAGCAAGGACCCTGCCAAGGAGGGCAGGCTGGAGCTCCACCTCGTTGGAGGTTTTGATGATGAGTCAAAGACGTCCCACAAACTCAGCCTTAACCTATTGTCGGCCTtccagagacagaaagaggatatTCACCTAGAGACCTGCTGCATCACAGAGATGAATGACGTCTTAGTGGACGGAGCGCACAGACCGGGTGTGCATGGcatagGTATAAATATTAAAACAGGGGAGGTGTTCCCCGCCTCGTTCCCTTACAAAGGACCCGCGGAGGAGCTGCGATCAGCACGGACATTCACTGGGGGCCAGATGGCTGATATATATGACTCGAACAAAGGAGTTGTGAAGATAGGCCCATGTAAGTGGTCCCCGAATCTGGATATTTCCTTCTGGCTGTCGCAAGACGATGACACCATCTTAAAGTACCTATCCACGTCCCCAACGGCTGAGCCACCACACTTTGTCCAGCACATCAAGTCCACCATCCAGTTCCTCCTGGAGCACCCCAGTTCAGACAGCGTCTTCCCTGGAGGACAGCCCCAGCACTACCGCAGAACAGAGCAGGGGGACTGGGAGAATGTTAACCAGACATAAAGGGCTTGAGACCCTTCTCTAACCCCCTATTACTTTGACTTTCCCTGGAATCTGTCCGGAAATGGAATCACTCCTTAACTTCTGGAAGACAAGACACTGTGACCCTCCTCTTTACGCCATTGTGGGCATCACATGTTATtgtttttttgacttggtaccagtactccctgtatatagcctctttattttaattttattgttgctcttttattttttacttttgtttgtttagtaattatttttcttaactgcattgttggttaatggcttgtaagtaagcattttacagtaaggtaaaattgtattcggtgcatgtgacaaataaaatttgttttgattt

Function

NR:

description
protein N-terminal asparagine amidohydrolase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008418 protein-N-terminal asparagine amidohydrolase activity molecular_function

KEGG:

id description
K14662 NTAN1; protein N-terminal asparagine amidohydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021556815.2 True 1515 mRNA 0.46 10 13674650 13681639

Neighbor

gene id symbol gene type direction distance location
LOC110485695 LOC106564561 coding downstream 2566 13665802 ~ 13672084 (-)
LOC110485696 LOC106564559 coding downstream 9355 13657453 ~ 13665295 (-)
LOC100136256 LOC100136256 coding downstream 53072 13619768 ~ 13652557 (-)
LOC110485698 LOC106564568 coding downstream 60567 13600728 ~ 13614083 (-)
LOC110485683 LOC106589359 coding downstream 123986 13544642 ~ 13550664 (-)
LOC110485693 LOC106589449 coding upstream 8124 13689763 ~ 13698310 (-)
c13h22orf23 cssa12h22orf23 coding upstream 41182 13722821 ~ 13726634 (-)
LOC110485690 sox10 coding upstream 46873 13728512 ~ 13733700 (-)
LOC110485689 LOC106564549 coding upstream 71457 13753096 ~ 13762248 (-)
smdt1b NA coding upstream 99936 13781575 ~ 13783130 (-)
G1145292 NA non-coding downstream 13432 13660558 ~ 13661218 (-)
G1145234 NA non-coding downstream 118360 13556069 ~ 13556290 (-)
G1145209 NA non-coding downstream 156918 13517440 ~ 13517732 (-)
G1145203 NA non-coding downstream 173990 13499483 ~ 13500660 (-)
G1145224 NA non-coding upstream 7489 13689128 ~ 13700548 (-)
G1145301 NA non-coding upstream 25588 13707227 ~ 13707457 (-)
G1145303 NA non-coding upstream 28984 13710623 ~ 13710888 (-)
G1145305 NA non-coding upstream 29566 13711205 ~ 13711453 (-)
G1145306 NA non-coding upstream 30103 13711742 ~ 13711976 (-)
G1145110 LOC106589620 other downstream 313842 13357074 ~ 13360808 (-)
G1145046 LOC106589870 other downstream 380507 13292935 ~ 13294143 (-)
LOC110485655 rab3d other downstream 503493 13163816 ~ 13178960 (-)
G1145035 NA other downstream 548052 13124870 ~ 13126598 (-)
LOC110485704 NA other upstream 121927 13798679 ~ 13812239 (-)
G1145789 LOC106588930 other upstream 405313 14086952 ~ 14087567 (-)
G1145790 NA other upstream 408019 14089658 ~ 14090787 (-)
G1145830 LOC103354157 other upstream 495608 14177247 ~ 14180330 (-)
G1146251 NA other upstream 1028943 14710582 ~ 14711954 (-)

Expression


Co-expression Network