G1143380


Basic Information

Item Value
gene id G1143380
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 11157886 ~ 11159261 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1303981
GGAGGGTTTTGTCCTTCTCCTTTATCATACACTAGAAGATCTCACCGACAGAATGTTAAATGTTATAAACACTGACATTTCAAACTCTTGTCGAACATAAATGTTTCACTCTGAAATCATGTTGATTTACAAATATGTCTGTTTCACCACATGTATAATACTAAGATGAGGGTAATAACTCAAGACAAAGGAGAGAGTGTGACTTCCTCctcttgtgtgtgagagagatacgAAACAACTGCTGTGTCAGTAAGTCTCAAattcctcatgttcctctctcctcacttcaGTAGGAATAATCAAGGATTGGAGAAGAAGGAACCTAGGGTCTTGTCCTCCACGCTTTCCTGTGccgttttgagaaggagacgaggagagaggacacGAGGAATCTGCCATTGCACCCAGAAGCTGAGTTCTGATTCTTTACCCTTCACCCAGAGTTGTGCTTTCGATCACTCCCCCTAATGCATTTAAAAGCATTGGAAAGGTGCAAGCATGGCTAGTGTGAGTTCCCTTACACCAGTCCATTCTTTTTAAAATCATGACAGGGAGTATAAGCGCACACACTTCAGGAGAAGAAACATAGCTACTGTCCCACAGTAGCTGCTGTTCTGTGATCTCCAGTATCAGTGCAGAGCACTAAGTTAGCGTGCTAATGTAGCCTACAGTAACTAAGCAGTAACTCAACTCCTTTTGGCCCGAGGATTAAGAGACATATTTGCTTATCTTTATCTCattgtatttatctctctctctctcattgtattTATCTCTTATTGTATTTATCTCCCTCATTGTatgtatctctctccatctctctctctctcattgtattTATCTCCCTCATTGTAtttatctctccatctcattGTATTTATCTCTCTTATTATATTTATCTCTCTCATTGTATTTATCTCGCTCTCATTGtatttctttctccatctctcattgtatttctctctccatctctctcattgtatttatctctccatctctgtatttATCTCTCTTATTATATTTATCTCTCTCATTGTATTTATCTCGCTCTCATTGtatttctttctccatctccctcattgtatttctctctccatctctctcattgtatttctctctccattgtatttctctctccatctctctcattgtatttctctctccatctctctcattgtatttctctccatctctctcattgtatttctctccatctctctcattgtatttctctctccatctctctcattgtatttctctctccatctctctcattgtatttctctccatctctctcattgtatttctctccatctctctcattgtaTTTGTCTCTCTCATTGTATTTATCTCATTATATTTCTCTcttatatttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1303981 True 1376 TUCP 0.38 1 11157886 11159261

Neighbor

gene id symbol gene type direction distance location
LOC110485570 LOC106590535 coding downstream 41794 11115135 ~ 11116092 (-)
LOC118938431 LOC106564445 coding downstream 47256 11107546 ~ 11110630 (-)
LOC118938429 NA coding downstream 56673 10981682 ~ 11101213 (-)
LOC110494931 cacna1a coding downstream 244344 10780341 ~ 10913542 (-)
LOC110487189 LOC106590640 coding downstream 395519 10740805 ~ 10762367 (-)
LOC118938432 NA coding upstream 73224 11218089 ~ 11233755 (-)
LOC110485558 LOC106590506 coding upstream 164382 11323643 ~ 11359141 (-)
LOC110485554 LOC106590435 coding upstream 266495 11425756 ~ 11429422 (-)
LOC110485550 LOC106564453 coding upstream 275371 11434632 ~ 11446652 (-)
LOC118938427 LOC106564452 coding upstream 287760 11447021 ~ 11494371 (-)
G1143378 LOC106592053 non-coding downstream 694 11103854 ~ 11157192 (-)
G1143398 LOC106564447 non-coding downstream 29762 11127033 ~ 11128124 (-)
G1143388 NA non-coding downstream 60956 11096625 ~ 11096930 (-)
G1143387 NA non-coding downstream 80677 11076918 ~ 11077209 (-)
G1143385 NA non-coding downstream 89970 11067686 ~ 11067916 (-)
G1143410 NA non-coding upstream 16219 11175480 ~ 11175783 (-)
G1143414 NA non-coding upstream 21027 11180288 ~ 11180969 (-)
G1143425 NA non-coding upstream 50449 11209710 ~ 11209989 (-)
G1143436 NA non-coding upstream 86962 11246223 ~ 11246446 (-)
G1142757 NA other downstream 591421 10564460 ~ 10566465 (-)
G1142620 NA other downstream 858519 10295744 ~ 10299367 (-)
lgals2b LOC106590712 other downstream 1055368 10097922 ~ 10102555 (-)
G1142121 NA other downstream 1175620 9980348 ~ 9982266 (-)
G1143449 NA other upstream 121801 11281062 ~ 11282092 (-)
LOC110485539 cxcl12b other upstream 641209 11797902 ~ 11811263 (-)
G1143743 NA other upstream 792334 11951595 ~ 11952568 (-)

Expression


Co-expression Network