G1143657


Basic Information

Item Value
gene id G1143657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 11773047 ~ 11773540 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1304324
caccctgccTATTCCCTCTATAACACTATCTTGTACAGGGccctgggtggcaggtagcctagcagcacCCTGCCTGTTCCCTCTATAACACTATCTTGTACAGGGccctgggtggcaggtagcctagcagcacCCTGCCTATTCCCTCTATAACACTATCTTGTACAGGGCcctgggtggcaggtagactagcagcACCCTGCCTGTTCCCTCTATAACACTATCTTGTACAGG
>TU1304326
caccctgccTATTCCCTCTATAACACTATCTTGTACAGGGccctgggtggcaggtagcctagcagcacCCTGCCTGTTCCCTCTATAACACTATCTTGTACAGGGccctgggtggcaggtagcctagcagcacCCTGCCTATTCCCTCTATAACACTATCTTGTACAGGGccctgggtggcaggtagcctagcagcacCCTGCCTATTCCCTCTATAACACTATCTTGTACAGGGccctgggtggcaggtagcctagcagcacCCTGCCTATTCCCCCTATAACACTATCTTGTACAGGGccctgggtggcaggtagcctagcagcacCCTGCCTATTCCCTCTATAACACTATCTTGTACAGGGCcctgggtggcaggtagactagcagcACCCTGCCTGTTCCCTCTATAACACTATCTTGTACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1304324 False 234 lncRNA 0.54 2 11773047 11773540
TU1304326 True 429 lncRNA 0.55 2 11773047 11773540

Neighbor

gene id symbol gene type direction distance location
LOC118938530 NA coding downstream 35971 11736364 ~ 11737076 (-)
LOC110485542 LOC106564456 coding downstream 40598 11723726 ~ 11732449 (-)
LOC110485529 LOC106589785 coding downstream 50941 11713458 ~ 11722106 (-)
LOC110485537 mcrip2 coding downstream 60712 11706574 ~ 11712341 (-)
LOC118938427 LOC106564452 coding downstream 278676 11447021 ~ 11494371 (-)
LOC110485539 cxcl12b coding upstream 24362 11797902 ~ 11811263 (-)
LOC110485534 LOC106564462 coding upstream 100441 11873981 ~ 11875822 (-)
LOC110487235 xpnpep1 coding upstream 118633 11892173 ~ 11905783 (-)
LOC110485617 LOC106590349 coding upstream 133362 11906902 ~ 11938426 (-)
LOC110485629 NA coding upstream 585313 12358008 ~ 12366285 (-)
G1143652 NA non-coding downstream 10715 11759602 ~ 11762332 (-)
G1143643 NA non-coding downstream 23794 11746462 ~ 11749253 (-)
G1143588 NA non-coding downstream 155535 11615798 ~ 11617512 (-)
G1143568 NA non-coding downstream 200228 11566074 ~ 11572819 (-)
G1143682 NA non-coding upstream 58205 11831745 ~ 11832405 (-)
G1143688 NA non-coding upstream 63852 11837392 ~ 11838515 (-)
G1143729 NA non-coding upstream 159542 11933082 ~ 11933581 (-)
G1143767 NA non-coding upstream 223382 11996922 ~ 11998113 (-)
G1143785 NA non-coding upstream 247590 12021130 ~ 12032311 (-)
LOC110485554 LOC106590435 other downstream 343682 11425756 ~ 11429422 (-)
G1143449 NA other downstream 490955 11281062 ~ 11282092 (-)
G1143380 NA other downstream 613786 11157886 ~ 11159261 (-)
LOC110494931 cacna1a other downstream 950680 10780341 ~ 10913542 (-)
G1143743 NA other upstream 178055 11951595 ~ 11952568 (-)
G1143771 NA other upstream 269568 12043108 ~ 12081882 (-)
G1144335 LOC106564512 other upstream 841436 12614976 ~ 12615559 (-)

Expression


Co-expression Network