Gene
RNA
| Item | Value |
|---|---|
| gene id | G1143785 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 12021130 ~ 12032311 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1304460 | True | 422 | lncRNA | 0.37 | 2 | 12021130 | 12032311 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485617 | LOC106590349 | coding | downstream | 82704 | 11906902 ~ 11938426 (-) |
| LOC110487235 | xpnpep1 | coding | downstream | 115347 | 11892173 ~ 11905783 (-) |
| LOC110485534 | LOC106564462 | coding | downstream | 145308 | 11873981 ~ 11875822 (-) |
| LOC110485539 | cxcl12b | coding | downstream | 209867 | 11797902 ~ 11811263 (-) |
| LOC118938530 | NA | coding | downstream | 284054 | 11736364 ~ 11737076 (-) |
| LOC110485629 | NA | coding | upstream | 326542 | 12358008 ~ 12366285 (-) |
| LOC110487266 | NA | coding | upstream | 383706 | 12416017 ~ 12448563 (-) |
| LOC110485637 | LOC106590256 | coding | upstream | 679373 | 12711684 ~ 12720418 (-) |
| LOC118938209 | LOC106564503 | coding | upstream | 690231 | 12722542 ~ 12744218 (-) |
| LOC110493438 | LOC106564504 | coding | upstream | 721875 | 12754186 ~ 12759727 (-) |
| G1143767 | NA | non-coding | downstream | 23017 | 11996922 ~ 11998113 (-) |
| G1143729 | NA | non-coding | downstream | 87549 | 11933082 ~ 11933581 (-) |
| G1143688 | NA | non-coding | downstream | 182615 | 11837392 ~ 11838515 (-) |
| G1143682 | NA | non-coding | downstream | 188725 | 11831745 ~ 11832405 (-) |
| G1143657 | NA | non-coding | downstream | 247590 | 11773047 ~ 11773540 (-) |
| G1143799 | NA | non-coding | upstream | 13995 | 12046306 ~ 12047107 (-) |
| G1143734 | NA | non-coding | upstream | 29399 | 12061710 ~ 12062226 (-) |
| G1143806 | NA | non-coding | upstream | 40241 | 12072552 ~ 12073309 (-) |
| G1143769 | NA | non-coding | upstream | 51514 | 12083825 ~ 12086994 (-) |
| G1143812 | NA | non-coding | upstream | 60087 | 12092398 ~ 12092706 (-) |
| G1143743 | NA | other | downstream | 68562 | 11951595 ~ 11952568 (-) |
| LOC118938427 | LOC106564452 | other | downstream | 526790 | 11447021 ~ 11494371 (-) |
| LOC110485554 | LOC106590435 | other | downstream | 591765 | 11425756 ~ 11429422 (-) |
| G1143449 | NA | other | downstream | 739038 | 11281062 ~ 11282092 (-) |
| G1143771 | NA | other | upstream | 10797 | 12043108 ~ 12081882 (-) |
| G1144335 | LOC106564512 | other | upstream | 582665 | 12614976 ~ 12615559 (-) |
| G1144338 | NA | other | upstream | 585648 | 12617959 ~ 12618158 (-) |
| G1145035 | NA | other | upstream | 1092559 | 13124870 ~ 13126598 (-) |
