G1143799


Basic Information

Item Value
gene id G1143799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 12046306 ~ 12047107 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1304476
gatttgatgaaataagtcttcactttaataatgccaaagacacgacagtggtTACTTCAGCCCCCTGCAAGTTCCTCTCTGTGGTGCTATAATAGTTTTAACTTACAGTAGGGGACCTTGTATGGACACAAAGCAAGATTAATGATCGCTTTATGACTTTATTGTAAGACACTATTAATACATTTCCCTCAAAGAGCTAATGTACATAGTACCAGTCTGTCTGTAGGTACATTACATGTTTGAGCCACACTCCAGTAGGTATATCATGTGTGTACATAGTACCAGTCTGTCTGTAGGTACATTACATGTTTGAGCCAAACTCCAGTAGGTATATCATGTGTGTACATAGTACCAGTCTGTCTGTAGGTACATTACATGTTTGAGCCAAACTCCAGTAGGTATATCATGTGTGTACATAGTACCAGTCTGTCTGTAGGTACATTACATGTTTGAGCCAAACTCCAGTAGGTATATCATGTGTGTACATAGTACCAGTCAGTTAGTATATAAAAAAGACTATTACAAGTGAAAGACGACATAGATTCAAAGCCAATGTAGTGACAGGTTGTTTGATAGTCTGACCAAATAGGCCATCACCATGACACCGGAGACAAGTGCATGCTGGACATTCCGATGCCATGCCCAGCTGACCAATGAGCTGACACTTGTGACCCTGAGAGGGGAATGGCTTAGGGGGATGACATGAGTTAACGAGTTTACAACATTGTCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1304476 True 732 lncRNA 0.41 2 12046306 12047107

Neighbor

gene id symbol gene type direction distance location
LOC110485617 LOC106590349 coding downstream 107880 11906902 ~ 11938426 (-)
LOC110487235 xpnpep1 coding downstream 140523 11892173 ~ 11905783 (-)
LOC110485534 LOC106564462 coding downstream 170484 11873981 ~ 11875822 (-)
LOC110485539 cxcl12b coding downstream 235043 11797902 ~ 11811263 (-)
LOC118938530 NA coding downstream 309230 11736364 ~ 11737076 (-)
LOC110485629 NA coding upstream 311746 12358008 ~ 12366285 (-)
LOC110487266 NA coding upstream 368910 12416017 ~ 12448563 (-)
LOC110485637 LOC106590256 coding upstream 664577 12711684 ~ 12720418 (-)
LOC118938209 LOC106564503 coding upstream 675435 12722542 ~ 12744218 (-)
LOC110493438 LOC106564504 coding upstream 707079 12754186 ~ 12759727 (-)
G1143785 NA non-coding downstream 13995 12021130 ~ 12032311 (-)
G1143791 NA non-coding downstream 16142 12029109 ~ 12030164 (-)
G1143767 NA non-coding downstream 48193 11996922 ~ 11998113 (-)
G1143729 NA non-coding downstream 112725 11933082 ~ 11933581 (-)
G1143688 NA non-coding downstream 207791 11837392 ~ 11838515 (-)
G1143734 NA non-coding upstream 14603 12061710 ~ 12062226 (-)
G1143806 NA non-coding upstream 25445 12072552 ~ 12073309 (-)
G1143769 NA non-coding upstream 36718 12083825 ~ 12086994 (-)
G1143812 NA non-coding upstream 45291 12092398 ~ 12092706 (-)
G1143813 NA non-coding upstream 47145 12094252 ~ 12095734 (-)
G1143743 NA other downstream 93738 11951595 ~ 11952568 (-)
LOC118938427 LOC106564452 other downstream 551966 11447021 ~ 11494371 (-)
LOC110485554 LOC106590435 other downstream 616941 11425756 ~ 11429422 (-)
G1143449 NA other downstream 764214 11281062 ~ 11282092 (-)
G1144335 LOC106564512 other upstream 567869 12614976 ~ 12615559 (-)
G1144338 NA other upstream 570852 12617959 ~ 12618158 (-)
G1145035 NA other upstream 1077763 13124870 ~ 13126598 (-)
LOC110485655 rab3d other upstream 1118407 13163816 ~ 13178960 (-)

Expression


Co-expression Network