Gene
RNA
| Item | Value |
|---|---|
| gene id | G1144335 |
| gene name | LOC106564512 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 12614976 ~ 12615559 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1305143 | False | 520 | TUCP | 0.56 | 1 | 12614976 | 12615495 |
| TU1305145 | True | 441 | TUCP | 0.55 | 1 | 12615119 | 12615559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487266 | NA | coding | downstream | 166413 | 12416017 ~ 12448563 (-) |
| LOC110485629 | NA | coding | downstream | 254646 | 12358008 ~ 12366285 (-) |
| LOC110485617 | LOC106590349 | coding | downstream | 676550 | 11906902 ~ 11938426 (-) |
| LOC110487235 | xpnpep1 | coding | downstream | 709193 | 11892173 ~ 11905783 (-) |
| LOC110485534 | LOC106564462 | coding | downstream | 739154 | 11873981 ~ 11875822 (-) |
| LOC110485637 | LOC106590256 | coding | upstream | 96125 | 12711684 ~ 12720418 (-) |
| LOC118938209 | LOC106564503 | coding | upstream | 106983 | 12722542 ~ 12744218 (-) |
| LOC110493438 | LOC106564504 | coding | upstream | 138627 | 12754186 ~ 12759727 (-) |
| LOC110485521 | LOC106589832 | coding | upstream | 256326 | 12871885 ~ 12878585 (-) |
| LOC110485520 | LOC106590222 | coding | upstream | 265389 | 12880948 ~ 12883307 (-) |
| G1144332 | NA | non-coding | downstream | 5541 | 12608568 ~ 12609435 (-) |
| G1144331 | NA | non-coding | downstream | 7614 | 12606979 ~ 12607362 (-) |
| G1144328 | NA | non-coding | downstream | 8458 | 12606114 ~ 12606518 (-) |
| G1144327 | NA | non-coding | downstream | 9320 | 12605375 ~ 12605656 (-) |
| G1144329 | NA | non-coding | downstream | 9675 | 12605088 ~ 12605301 (-) |
| G1144336 | NA | non-coding | upstream | 1107 | 12616666 ~ 12616885 (-) |
| G1144337 | NA | non-coding | upstream | 1540 | 12617099 ~ 12617747 (-) |
| G1144340 | NA | non-coding | upstream | 4882 | 12620441 ~ 12621107 (-) |
| G1144345 | NA | non-coding | upstream | 11109 | 12626668 ~ 12626869 (-) |
| G1144349 | NA | non-coding | upstream | 17534 | 12633093 ~ 12633447 (-) |
| G1143771 | NA | other | downstream | 533094 | 12043108 ~ 12081882 (-) |
| G1143743 | NA | other | downstream | 662408 | 11951595 ~ 11952568 (-) |
| LOC110485539 | cxcl12b | other | downstream | 803745 | 11797902 ~ 11811263 (-) |
| LOC118938427 | LOC106564452 | other | downstream | 1120636 | 11447021 ~ 11494371 (-) |
| G1144338 | NA | other | upstream | 2400 | 12617959 ~ 12618158 (-) |
| G1145035 | NA | other | upstream | 509311 | 13124870 ~ 13126598 (-) |
| LOC110485655 | rab3d | other | upstream | 549955 | 13163816 ~ 13178960 (-) |
| G1145046 | LOC106589870 | other | upstream | 677376 | 13292935 ~ 13294143 (-) |
| G1145110 | LOC106589620 | other | upstream | 741515 | 13357074 ~ 13360808 (-) |
