Gene
RNA
| Item | Value |
|---|---|
| gene id | G1144338 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 12617959 ~ 12618158 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transcription activator BRG1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1305149 | True | 200 | TUCP | 0.69 | 1 | 12617959 | 12618158 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487266 | NA | coding | downstream | 169396 | 12416017 ~ 12448563 (-) |
| LOC110485629 | NA | coding | downstream | 257629 | 12358008 ~ 12366285 (-) |
| LOC110485617 | LOC106590349 | coding | downstream | 679533 | 11906902 ~ 11938426 (-) |
| LOC110487235 | xpnpep1 | coding | downstream | 712176 | 11892173 ~ 11905783 (-) |
| LOC110485534 | LOC106564462 | coding | downstream | 742137 | 11873981 ~ 11875822 (-) |
| LOC110485637 | LOC106590256 | coding | upstream | 93526 | 12711684 ~ 12720418 (-) |
| LOC118938209 | LOC106564503 | coding | upstream | 104384 | 12722542 ~ 12744218 (-) |
| LOC110493438 | LOC106564504 | coding | upstream | 136028 | 12754186 ~ 12759727 (-) |
| LOC110485521 | LOC106589832 | coding | upstream | 253727 | 12871885 ~ 12878585 (-) |
| LOC110485520 | LOC106590222 | coding | upstream | 262790 | 12880948 ~ 12883307 (-) |
| G1144337 | NA | non-coding | downstream | 212 | 12617099 ~ 12617747 (-) |
| G1144336 | NA | non-coding | downstream | 1074 | 12616666 ~ 12616885 (-) |
| G1144332 | NA | non-coding | downstream | 8524 | 12608568 ~ 12609435 (-) |
| G1144331 | NA | non-coding | downstream | 10597 | 12606979 ~ 12607362 (-) |
| G1144328 | NA | non-coding | downstream | 11441 | 12606114 ~ 12606518 (-) |
| G1144340 | NA | non-coding | upstream | 2283 | 12620441 ~ 12621107 (-) |
| G1144345 | NA | non-coding | upstream | 8510 | 12626668 ~ 12626869 (-) |
| G1144349 | NA | non-coding | upstream | 14935 | 12633093 ~ 12633447 (-) |
| G1144358 | NA | non-coding | upstream | 24901 | 12643059 ~ 12643860 (-) |
| G1144387 | NA | non-coding | upstream | 63831 | 12681989 ~ 12682429 (-) |
| G1144335 | LOC106564512 | other | downstream | 2400 | 12614976 ~ 12615559 (-) |
| G1143771 | NA | other | downstream | 536077 | 12043108 ~ 12081882 (-) |
| G1143743 | NA | other | downstream | 665391 | 11951595 ~ 11952568 (-) |
| LOC110485539 | cxcl12b | other | downstream | 806728 | 11797902 ~ 11811263 (-) |
| G1145035 | NA | other | upstream | 506712 | 13124870 ~ 13126598 (-) |
| LOC110485655 | rab3d | other | upstream | 547356 | 13163816 ~ 13178960 (-) |
| G1145046 | LOC106589870 | other | upstream | 674777 | 13292935 ~ 13294143 (-) |
| G1145110 | LOC106589620 | other | upstream | 738916 | 13357074 ~ 13360808 (-) |
| LOC110485696 | LOC106564559 | other | upstream | 1045022 | 13657453 ~ 13665295 (-) |
