Gene
RNA
| Item | Value |
|---|---|
| gene id | G1145064 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 13187343 ~ 13187920 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transcription elongation factor 1 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1306075 | True | 258 | lncRNA | 0.43 | 2 | 13187343 | 13187920 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487513 | LOC106589682 | coding | downstream | 1359 | 13179595 ~ 13185984 (-) |
| LOC110485655 | rab3d | coding | downstream | 8383 | 13163816 ~ 13178960 (-) |
| LOC110485650 | LOC106589714 | coding | downstream | 26175 | 13154136 ~ 13161168 (-) |
| LOC110516103 | LOC106589920 | coding | downstream | 35497 | 13144075 ~ 13151846 (-) |
| LOC110487275 | LOC106589720 | coding | downstream | 43406 | 13141743 ~ 13143937 (-) |
| LOC118938212 | LOC106589906 | coding | upstream | 22950 | 13210870 ~ 13262316 (-) |
| LOC110487278 | LOC106589852 | coding | upstream | 143595 | 13331515 ~ 13346367 (-) |
| LOC110485678 | LOC106589534 | coding | upstream | 251778 | 13439698 ~ 13458698 (-) |
| LOC110485679 | LOC106564573 | coding | upstream | 275069 | 13462989 ~ 13470981 (-) |
| LOC110485677 | LOC106564572 | coding | upstream | 283304 | 13471224 ~ 13494372 (-) |
| G1145051 | NA | non-coding | downstream | 25035 | 13161890 ~ 13162308 (-) |
| G1145035 | NA | non-coding | downstream | 62066 | 13124870 ~ 13126598 (-) |
| G1145019 | NA | non-coding | downstream | 134343 | 13050008 ~ 13053000 (-) |
| G1144987 | NA | non-coding | downstream | 254046 | 12932587 ~ 12933297 (-) |
| G1145069 | NA | non-coding | upstream | 1508 | 13189428 ~ 13213171 (-) |
| G1145063 | NA | non-coding | upstream | 7505 | 13195425 ~ 13196688 (-) |
| G1145043 | NA | non-coding | upstream | 18731 | 13206651 ~ 13209542 (-) |
| G1145123 | NA | non-coding | upstream | 99411 | 13287331 ~ 13288035 (-) |
| G1145127 | NA | non-coding | upstream | 108863 | 13296783 ~ 13297090 (-) |
| G1144338 | NA | other | downstream | 569185 | 12617959 ~ 12618158 (-) |
| G1144335 | LOC106564512 | other | downstream | 571784 | 12614976 ~ 12615559 (-) |
| LOC110485629 | NA | other | downstream | 821058 | 12358008 ~ 12366285 (-) |
| G1145046 | LOC106589870 | other | upstream | 105015 | 13292935 ~ 13294143 (-) |
| G1145110 | LOC106589620 | other | upstream | 169154 | 13357074 ~ 13360808 (-) |
| LOC110485696 | LOC106564559 | other | upstream | 475260 | 13657453 ~ 13665295 (-) |
| LOC110485704 | NA | other | upstream | 615646 | 13798679 ~ 13812239 (-) |
| G1145789 | LOC106588930 | other | upstream | 899032 | 14086952 ~ 14087567 (-) |
