G1145063


Basic Information

Item Value
gene id G1145063
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 13195425 ~ 13196688 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1306074
GAAAAACTAAAATAATCAGATCAATAATACTAATTTGGACCTACTGTTTATGTCCCATCCTACCTCTCCCTTTTAGTACGTTGTCTCTAACAAAGGAATGATGCAACATGTCTTCAGGGAGATACCGTAACCATTTCCACATTAAGAAAAAGGACCTGGGATATTCATAGAAAATATTTCAGAAACCACTTGAGAGTTTAGACTGTTCCAGAAAGCAGGATCAATGACTTAGCCAGCTAACAGTCCCAACAAAATCCAACTTGAAATCGTCATGGTATAATTGACTTGACAACCAACAACAACCCATATTCAAGTTTAGCTTTCTAAATATAAAATAAAGATATATTTAACTGCatatcaaagttagctggctaatttAACAATCCTGCTTTCTGGAACACCCCACTAGGTTACTCTGCATAAACACACTCAGAGTCACACCGAATATACCCCAATGGAATGACCCAACACTATGGTATTGCTGTACACTGTGGTATTGTGTATCTCTGTACACAGGGGAGAGTAAAAACTAATTGTGGTAAAACCAAAACTAACCCAAGAGCAGCTACTAACTGTATAATTCTACCAGTAAGCTAGGAGCCATGACAACTGACCGCTAAAATGAAGTCTGTATGAATTAAAACGGTGAGTAGGGGAATAGGTTGACTTAACCAGAGTCATATATACCTCTAAGGtcacatcccaaatggaaccccatttggggcgtaatctatatagggctctggactGAACTATGGCTACGCAAGACAGTCTCGGTGGACGCCAGGTCACTAGTGTGGGAGATGTGCGGTGAGGTAAAGGTCAGAGGTTGCTTACCAGGCTGACTACATTGTAGGCATCTGCCAGATCTCACAACGTCTGGATAGTTGGTTcacatatcagctaaccacatgaCACAGCAATATGATGCCCAACAGCAGTTGATGACGTGGCACGCAACTATTGGTTGATGCAATGCGACGTCTGCAATGTAGTCGGCCTGGAACGGGACCATCATCTTGAGCTGAAGACTGGCAGTGATTGGTGAGAAACAGACGAGCGCCACCTCTAAATCAGCTTCCTGTTCCAACGTGAGGTCTTCCGCCCCGGTGAGCCTGGGCTACTGATTGGCTGCTTCACAAGCGTCTATCCAATCACTGTACACATCCACAGGCTCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1306074 True 1181 lncRNA 0.43 2 13195425 13196688

Neighbor

gene id symbol gene type direction distance location
LOC110487513 LOC106589682 coding downstream 9441 13179595 ~ 13185984 (-)
LOC110485655 rab3d coding downstream 16465 13163816 ~ 13178960 (-)
LOC110485650 LOC106589714 coding downstream 34257 13154136 ~ 13161168 (-)
LOC110516103 LOC106589920 coding downstream 43579 13144075 ~ 13151846 (-)
LOC110487275 LOC106589720 coding downstream 51488 13141743 ~ 13143937 (-)
LOC118938212 LOC106589906 coding upstream 14182 13210870 ~ 13262316 (-)
LOC110487278 LOC106589852 coding upstream 134827 13331515 ~ 13346367 (-)
LOC110485678 LOC106589534 coding upstream 243010 13439698 ~ 13458698 (-)
LOC110485679 LOC106564573 coding upstream 266301 13462989 ~ 13470981 (-)
LOC110485677 LOC106564572 coding upstream 274536 13471224 ~ 13494372 (-)
G1145064 NA non-coding downstream 7505 13187343 ~ 13187920 (-)
G1145051 NA non-coding downstream 33117 13161890 ~ 13162308 (-)
G1145035 NA non-coding downstream 70148 13124870 ~ 13126598 (-)
G1145019 NA non-coding downstream 142425 13050008 ~ 13053000 (-)
G1145043 NA non-coding upstream 9963 13206651 ~ 13209542 (-)
G1145123 NA non-coding upstream 90643 13287331 ~ 13288035 (-)
G1145127 NA non-coding upstream 100095 13296783 ~ 13297090 (-)
G1145128 NA non-coding upstream 100737 13297425 ~ 13297736 (-)
G1145129 NA non-coding upstream 101188 13297876 ~ 13298606 (-)
G1144338 NA other downstream 577267 12617959 ~ 12618158 (-)
G1144335 LOC106564512 other downstream 579866 12614976 ~ 12615559 (-)
LOC110485629 NA other downstream 829140 12358008 ~ 12366285 (-)
G1145046 LOC106589870 other upstream 96247 13292935 ~ 13294143 (-)
G1145110 LOC106589620 other upstream 160386 13357074 ~ 13360808 (-)
LOC110485696 LOC106564559 other upstream 466492 13657453 ~ 13665295 (-)
LOC110485704 NA other upstream 606878 13798679 ~ 13812239 (-)
G1145789 LOC106588930 other upstream 890264 14086952 ~ 14087567 (-)

Expression


Co-expression Network