G1145046 (LOC106589870)


Basic Information

Item Value
gene id G1145046
gene name LOC106589870
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 13292935 ~ 13294143 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1306052
AAGTGTCAGTTTAATCACTAAACCATTATTGATTAGTTCAAAAGTATCCTGTTGAAAGAAAGATATACATAAACCCCCACTCCCACTTGATTTCATGGTGGCTGTATACATGTCAGAGCACTGTTTGTATTCTATGGAAAATACACTGAGAAAATAAAATGCATAGAATTTAGATATAAAAACATACTTTCCCTTTAACAGTTGATAATGGTTCAGTTCAGTTTAAAGCAGGTTCTGTGTGAATAGTAGGGTGGATACACAGATACAGCATAATGGATCAAGACTGGTCTTTCATTCTCAGTACCAGCCAACAGTAACACAGGCAAGGctgacagggttgtgttcattaggaaaATAACTTGAGTtcatcagggttgtgttcatcagggttgtgttcatcagggttgtgttcatcagggttgtgttcatcagggttgtgttcatcaaaataaaaaaaactgactcGAACAGGGAGGGCCTACCTGGACCTGGTCCAATAAGAAAAACACTGGTTTTGAATTTTCATTTCAAAGCACTTCGCCCTACTGAACAAAACCCAGGTTCCTCTGGATGGGTAACTGAGCTATACCCTTAGGGAAGGAGATCCACAAGGCACTTCAGTAATAACACCATCATTCACAGTGTTAGAGGCAGACTCAAGTCCCTCTTGTAGTATTACACAGAGAAAGCATTGGAGAATttggtagagagatagagagcgaacGAAATGATTGATCACATGACAGAGCAGCACTGGCAGGTCTTGCGTTTGGGAGCCATATCGACCCCTCCCTCCGCCTCTCCCCTGGTAGCGGTCAGTGTCTCTGGGGTGGCTGGAGCCTGCTCCCCCAAGGCCAGGGTCTGGGCCTTGGATGGGAACAGCAGGGGCTCCTGCTCTGGCTCAGTCCGGGGCTCCACTAGGGACACCTCCAGGAACTGGCCCCCAGGGAGGATGGCTGATTCTGGGGCCAGCGAGGCCTCCTCTTCCCCCTTGACTTCCACTTCAGTCTTCACTTCCACATCGCCCTCTGCCGGCTCGCCTGCAGCCTCTCCCTCTGCGTCGGGCCTGGGGGTGAGTAAGGTCTCAGAGTAGACGGGAACGGCAGCCACAACGCCATCATCTGGGGCCTGCAAGTCAGACACAGGAGCTTCCTCTACTGGCTGCGCCTCTTCCTCTCCACCACTGTTTCCCACACCCTCCATCTGTCT

Function

NR:

description
paralemmin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1306052 True 1209 TUCP 0.49 1 13292935 13294143

Neighbor

gene id symbol gene type direction distance location
LOC118938212 LOC106589906 coding downstream 30619 13210870 ~ 13262316 (-)
LOC110487513 LOC106589682 coding downstream 106951 13179595 ~ 13185984 (-)
LOC110485655 rab3d coding downstream 113975 13163816 ~ 13178960 (-)
LOC110485650 LOC106589714 coding downstream 131767 13154136 ~ 13161168 (-)
LOC110516103 LOC106589920 coding downstream 141089 13144075 ~ 13151846 (-)
LOC110487278 LOC106589852 coding upstream 37372 13331515 ~ 13346367 (-)
LOC110485678 LOC106589534 coding upstream 145555 13439698 ~ 13458698 (-)
LOC110485679 LOC106564573 coding upstream 168846 13462989 ~ 13470981 (-)
LOC110485677 LOC106564572 coding upstream 177081 13471224 ~ 13494372 (-)
LOC118938214 NA coding upstream 211582 13505725 ~ 13509915 (-)
G1145123 NA non-coding downstream 4900 13287331 ~ 13288035 (-)
G1145069 NA non-coding downstream 79764 13189428 ~ 13213171 (-)
G1145043 NA non-coding downstream 83393 13206651 ~ 13209542 (-)
G1145063 NA non-coding downstream 96247 13195425 ~ 13196688 (-)
G1145064 NA non-coding downstream 105015 13187343 ~ 13187920 (-)
G1145127 NA non-coding upstream 2640 13296783 ~ 13297090 (-)
G1145128 NA non-coding upstream 3282 13297425 ~ 13297736 (-)
G1145129 NA non-coding upstream 3733 13297876 ~ 13298606 (-)
G1145130 NA non-coding upstream 4483 13298626 ~ 13298911 (-)
G1145134 NA non-coding upstream 14686 13308829 ~ 13311827 (-)
G1145035 NA other downstream 166337 13124870 ~ 13126598 (-)
G1144338 NA other downstream 674777 12617959 ~ 12618158 (-)
G1144335 LOC106564512 other downstream 677376 12614976 ~ 12615559 (-)
LOC110485629 NA other downstream 926650 12358008 ~ 12366285 (-)
G1145110 LOC106589620 other upstream 62931 13357074 ~ 13360808 (-)
LOC110485696 LOC106564559 other upstream 369037 13657453 ~ 13665295 (-)
LOC110485704 NA other upstream 509423 13798679 ~ 13812239 (-)
G1145789 LOC106588930 other upstream 792809 14086952 ~ 14087567 (-)
G1145790 NA other upstream 795515 14089658 ~ 14090787 (-)

Expression


Co-expression Network