Gene
RNA
| Item | Value |
|---|---|
| gene id | G1145306 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 13711742 ~ 13711976 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| MICAL-like protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1306349 | True | 235 | lncRNA | 0.66 | 1 | 13711742 | 13711976 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485693 | LOC106589449 | coding | downstream | 13432 | 13689763 ~ 13698310 (-) |
| LOC110485694 | LOC106564562 | coding | downstream | 30103 | 13674650 ~ 13681639 (-) |
| LOC110485695 | LOC106564561 | coding | downstream | 39658 | 13665802 ~ 13672084 (-) |
| LOC110485696 | LOC106564559 | coding | downstream | 46447 | 13657453 ~ 13665295 (-) |
| LOC100136256 | LOC100136256 | coding | downstream | 90164 | 13619768 ~ 13652557 (-) |
| c13h22orf23 | cssa12h22orf23 | coding | upstream | 10845 | 13722821 ~ 13726634 (-) |
| LOC110485690 | sox10 | coding | upstream | 16536 | 13728512 ~ 13733700 (-) |
| LOC110485689 | LOC106564549 | coding | upstream | 41120 | 13753096 ~ 13762248 (-) |
| smdt1b | NA | coding | upstream | 69599 | 13781575 ~ 13783130 (-) |
| LOC110485704 | NA | coding | upstream | 86777 | 13798679 ~ 13812239 (-) |
| G1145305 | NA | non-coding | downstream | 289 | 13711205 ~ 13711453 (-) |
| G1145303 | NA | non-coding | downstream | 854 | 13710623 ~ 13710888 (-) |
| G1145301 | NA | non-coding | downstream | 4285 | 13707227 ~ 13707457 (-) |
| G1145224 | NA | non-coding | downstream | 11194 | 13689128 ~ 13700548 (-) |
| G1145292 | NA | non-coding | downstream | 50524 | 13660558 ~ 13661218 (-) |
| G1145307 | NA | non-coding | upstream | 269 | 13712245 ~ 13713276 (-) |
| G1145308 | micall1 | non-coding | upstream | 1747 | 13713723 ~ 13714941 (-) |
| G1145309 | NA | non-coding | upstream | 3699 | 13715675 ~ 13715984 (-) |
| G1145310 | NA | non-coding | upstream | 5333 | 13717309 ~ 13719386 (-) |
| G1145324 | NA | non-coding | upstream | 30555 | 13742531 ~ 13742775 (-) |
| G1145110 | LOC106589620 | other | downstream | 350934 | 13357074 ~ 13360808 (-) |
| G1145046 | LOC106589870 | other | downstream | 417599 | 13292935 ~ 13294143 (-) |
| LOC110485655 | rab3d | other | downstream | 540585 | 13163816 ~ 13178960 (-) |
| G1145035 | NA | other | downstream | 585144 | 13124870 ~ 13126598 (-) |
| G1145789 | LOC106588930 | other | upstream | 374976 | 14086952 ~ 14087567 (-) |
| G1145790 | NA | other | upstream | 377682 | 14089658 ~ 14090787 (-) |
| G1145830 | LOC103354157 | other | upstream | 465271 | 14177247 ~ 14180330 (-) |
| G1146251 | NA | other | upstream | 998606 | 14710582 ~ 14711954 (-) |
