XLOC_030764


Basic Information

Item Value
gene id XLOC_030764
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 3553600 ~ 3554809 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061920
AAACAACCTCATATTCATCTACATTTATTTCACGTcgttttttgtaaattaaaagtatgttttagACCTATTGAGTTAGTTTCGCATTTGTTTGAAATAGGTGCAATATAGAATAGTGATAGTAAACTAAAACGCCACATTCTGTGTTTGATGTGTGCTCTGAGGAGTATAACTTACATTGTAGAACAAAAAGACTTGTAATATTTACCGCAAATACAGTTTAGTTGTTAGAGAGTTCACCATAGGCCTAATAAACTGGAAAACTACAGCGACGGCATGGCAACAGTGATTCTATTGGATGTTGGCTTCGCCATTGCAGCATTTTCATTGGTCCGTCAAATTGTGCATCAAAATAACGCGGTAAGAGAACTTTTATAAATATTCTCCATATTATTGTTGCAGGTAGCGtcgttattaattattttccaccgaaattagtttaaatttgTTCTCAAACAGTACACTGAAACCGATGATAAACTTTAAATGACATTAGAGTTCGTCAGGTTGGATTTAATGgcgtttgactgtgaatgttcgAGTGACAAGTTTAACGCCACggtaacgGTTGTTTTTCATAcacttcatttttaaaacagaatttGTCGATAATAGACTAGACAAAATCAATCACATGATAAAAATACGAACCATAATGTGATATAGTGTGTGTCGCAACACTATCCGACAGCAACGAATATTCACGTTAGCGTGGTAAACTATATGgagtttgagcatcgatatcgcaatgtgtgcatccgcgaTAGTCAAGACATTCAATGTTGAGGATTATGACCAGAAACTACAGGTCGAGACACTGCAGCAGAACTGGGCCATAATAGAGgggtttatcatctgcatgtgtttttagggCCTGTGACGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061920 True 883 lncRNA 0.37 2 3553600 3554809

Neighbor

gene id symbol gene type direction distance location
XLOC_030763 NA coding downstream 51765 3473865 ~ 3501835 (-)
XLOC_030761 CABZ01084961.1 coding downstream 123245 3311008 ~ 3430355 (-)
XLOC_030762 NA coding downstream 199033 3352108 ~ 3354567 (-)
XLOC_030760 CABZ01076744.1 coding downstream 287483 3258123 ~ 3266117 (-)
XLOC_030759 CABZ01076737.1 coding downstream 344255 3184755 ~ 3209345 (-)
XLOC_030765 hspb1 coding upstream 13207 3568016 ~ 3584815 (-)
XLOC_030766 si:zfos-375h5.1 coding upstream 56689 3611498 ~ 3627110 (-)
XLOC_030767 FO704648.2 coding upstream 105849 3660658 ~ 3670238 (-)
XLOC_030768 FO704648.1 coding upstream 128244 3683053 ~ 3684402 (-)
XLOC_030769 mlxipl coding upstream 264381 3819190 ~ 3839285 (-)
XLOC_030758 NA non-coding downstream 384575 3167199 ~ 3169025 (-)
XLOC_030772 CU655870.1 non-coding upstream 381108 3935917 ~ 3936596 (-)
XLOC_030782 NA non-coding upstream 1066621 4621430 ~ 4622063 (-)
XLOC_030783 FO834903.1 non-coding upstream 1085650 4640459 ~ 4643289 (-)
XLOC_030784 NA non-coding upstream 1115462 4670271 ~ 4673865 (-)

Expression


Co-expression Network