XLOC_030807 (tnks1bp1)


Basic Information

Item Value
gene id XLOC_030807
gene name tnks1bp1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 6515741 ~ 6567464 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059941
GTGCAGTGTGTTGCTATGGCTGCGGTGGTGAAGGCGACCACCAGGGAAATGGCGCTCATTAACCCAGATGATGATTCATCTCCATCCTCTGCGCTCCCAGAAGACTCCCCGAAGCCATCGCTGGGCCCAAAACCACACCTCATGCCAAAACCATTCACCCTGCAAAGAAACCCTACCGTCCGCTCAATCCGAGCCCCAAAAACCAATTTCACAAAACACCTCCAGCGAGCCTCGTCTTCGGAAACACTTCTGGATTACACCAAGCCTAAAGAAATCACACCAAACGCAAACGGCACAGTAAACGGGTCCGCTTCTACACCCCAAAAAACAGACTTGATAGATAAACCAAAAAGCTCTGAGAGCAAAAATGCAGACGAAGATGTGCAAAAAGTTCAATTCAGAAGCAGAGCAAAATCATTGAGCTCTCAAAATGAgactttaaacaaacagaaaGCGCATGATGGCGAGTCTGAAACGGATGGCAAAGTGTCTCCACGATGCTGGCCGGCCCGAAATCGTCTCTCTGTCCATCTGACGTCCAAATTCGAGTCACCTGAGACTGCTATTAGAAATGATGCTCAAATCCACAAGGCGCCACTTTCTCCACCTGCAGTGTCAGAGTCCAAACCTGCGGTGGATAAAAAGGAAATGTTAGACGAAGAGATGAGCGGAGGCAGCATTAAACGAAGGATCAGCCTCCTGTTTGACCGATCTGCAGCGTCTCAGCGCCGGGACGCTGTCAACAGAAGAGACGTCACTCCTGCTGAAATAACTGTTGACATTAAACAGAGAATCCAGAATCTGAGCTTGGACTCGCCGAGGACGCGCTCGCCATCCACTGGAGCTCCTAAAAGTCCAACATCTGAGAAGAACCAGAGCTCCTCAGATGAGCTGCTGAATGAGAGATCATCAGAAAAAGTGGAAACAGAGACAAGTATAAAACCATCAAGAACAACAGAAAATAACACTGCTACATTTGTGGAAAATAGAGAAGAAAATGATGAtgattgtgatgatgatgatgatgatggagaagAAGATATGGAGAACTCTGTCATTATGCCTGTTTACAGACGAGTTGGATTAAGCTTCGATGCAGAGAAGAAACgaaaggaagaagaagaagaaaaacaaaaaaaggatgAGCAGTTAGAGAAGGAAAGAAAGCAACGAAAAGGAGAGGAAGAGAAAAAGCAAGAAGTGGAAAGACAAAGGCAGATAGAAGAAACAAGAAAGCAAGAGGAAGAACTAAAGAGAAAAATGGAAGAAGAAAGAAGACAGGCTGAAAAAGAAatagagagacagaaagaggagGAAAGAGCGAGAATGGAGAAACAACAGAAGGAAAGAGAACTGGAAGAAAAGAGACGAAAAATTCAGGAGATGGAAAGACAGAGAAAAGAAGAAAGACAGAGACAGGAACGAGAAAAAGAAGAGAGGttgaagaaagagagagaaattgaGGAGAGGAAACGAATTGAGGAGGAAAGACTGCGACAAGAGGAGCGATTGAGACAGGAACGAGAAAAAGAGAGGGTAAAGAAAGAAAAGGAGATGGAAGAAGAGAGACAACGGGTCCAAGAGCTGGAGAGACAGAAAGAGGAGGAAAGACGgaggaaagaagaagaagaaatggaGAGAATtaggaaagaaaaagaaattgaagAAGAAAGACGAAGAATTCAAGAGTTGGAGAGACAAATGGAAGAGGAAAGATTGAGAAAAGAACAAGAAATGGAGAGAAtaaggaaagaaaaagaaatggaaGAAGAAAGACGAAGAATTCAAGAGTTGGAGAGACACATGGAAGAGGAAAGATTGAGGAAAGAACAAGAAATGGAGAGAATAAGGAAAGAAAaggaaatggaggaagaaagaagaagaattcAAGAGTTAGAGAGACAGAAAGAAGAAGACAGATTGAGAAAAGAGAGGGAAATTGcgagattaaaaaaagaaaaagaaatggaaGAAGAAAGACGAAGGATTCAAGAACTGGAGAGACAGAAAGAGGAAGAAAGACTGAGAAAGGAGCAAGAAATAGagagaataaagaaagaaaaagaaattgaagaaaaaagaCAAAGAATTCAGGAATTAGAAAGACAGAAAGAGGAAGAAAGACtgagaaaagaaagagaaatggaGAGAAtaaggaaagaaaaagaaattgaggAAGAAAGACTGAGAATTCAAGAGTTGGAGAGACAGAAAGAGGAAGAAAGACTGAGAAAGGAGCAAGAAATGGagagaataaagaaagaaaaagaaatggaaGAAGAAAGACGAAGGATTCAGAAAttagaaagacagaaagaagagGAAAGATTaaggaaagaaagagaaatgGAAGAAGAAAGACAAAGAATTCAGCAGTTGGAGAGACAGAAAGAGGAGGAGAGAATAAGAAAGGAAAAAGAATTGGAAGAAGAGAGGAGGCGAATTCAAGAGTTTGAGAGACAAAGGGAAGAGGAAAgactaaaaaaagaaagagaaatggaGAGAATGAGGAAAGAAAAGGAAGAAGAAATGGAGAGATTGAAGAAAGAAAGAGATTTGGAAGAAGAGAGGAGAAAAATTCAAGAGTTGGAAAGACAGAAAGAGGAAGAAAGGCtgagaaaagaaagagaaattgAAAGAAtaaggaaagaaaaagaaatggaaGAAGAAAGGAGGAGGATTCAAGATttagaaagacagaaagaagaagaaagattaagaaaagagagagaaatgaaaGAAGAAAGACAGAGGAAAGAAAGAGAAATGGAAGAAGAAAGACGAAGGATTCAGGAATTAGAAAGACAGAAGGAAGAAGAACGACTGAGGAAAGAAAGAGAAATAGAAAGAGTaaggaaagagaaagaaatgGAAGAAGAAAGGAGGAGGATTCAGGAAAAAGAAAGACtaagaaaagaaagagaaatggaAGAAGAAAGACGAAGGAATCAGGAATTAGAAAGACAGAAGGAAGAGGAAAAATTGAGAAAAGAAAGAGAACTGGAGAGATTAAGgaaagaaatggaggaagaaagacgAAGAATCGAGGAGATTGAAAGACAAAAAGAAAGACTGAGACATGAAGGAGAAAAAATGATGGCGATGGAAATGTGTAAATCAGCAGAGCGGCCGCAAGAAGTTCCTACGAGTTTTGATTTAATATCGTTTGACGTTGAAGAACCGTCGCCGCCTGTCTCCTCCGATTCCATGGATGTCGAAGTAATTTACGATGATTTTTCGGTAAAACCACAAAGATGGGGAACCAGAGTGAGAGATTCTCCAACAACATCTCCAACCAGAGAAACCGCTGACCTCAGTCTACAGCCACAATTAAAATACAGTACACCGGGACTCCAAGAACCAGCCGGAGATCGGGTACATGTAGAAAACCTAATCGGATTTGAGCCTGAAGCATCCAGTCCACAGAACACGTCCTATATACATACAGAAAACAGACATCCGTCTTCATCTGAGGAGGAAACTGAGTGTACGCCAGAAGATCTGCTGGAGCCAGAAACTGAATTAAATGAGGATCAGTTGAAGGACTGTGAACCAGAAGAAGATCAGGACACAGAGAATCTAATCGAGGAAACAGAGGAACAAAGTGAAAACAGTGACACTGTTGACAGTCAGGGCACAGCGAGACTCAATCAAGCCCTTCAGAGACTGAATCAAGCCAGACGGCGAAAAACATCCAGTGATTCAGAAAACACAAATACCCCAATTCAGGAGGAGCCCGAACCACTGCCTCTTCTTGAGTCCTCAGCTCCTCCATTGGACTCCAGCGTTTTACGTTCCAAGGTCGATCTGGGAAAGAAGCGAAGTATAAAGCGCTCCAGACCGTCCCGTGCCGTCCGACAGAGAGCCGCTCTGCCTGCTCTGACTGAGGGAACAAACCCCGACTGGAGGTTCTGCGACTCCACAGATGCGAAAGTTCAGATTTCTAATGGAGGGGACTCAGAATCGGAAGAGGAACCATCCCAGGACGTCACGTCTTCTCCGGCCCCCAGTCAGCCCAAAAGAGTGTCTGTGTTTCCCGGGATGAACCCTTCAGCCTTGATGGCTCAGTTGAAGCGCAGGAGTGCCGCTCTAGATTCAGATGCTCAAGCAGAAGCTGCTACCCCTCCGTCTGTTCCCTCTCGCTCTCCCCGAACACCCAGCAAGACCCTCGGCCCCCGAGTGCTGCCCCCTGCTGACGCAAAGGATGCTAGGTAAGTGGACCAGAATCTAGAATGCATGTCTGCgtctgaaatcgcctactacacaggtactgcatttgaatataAATGTACTACTCAGCCAGTAGAAAAGTGCgttctgtacagtatgaatgtcagtAGTGTGAATTGAACTCATGTACCACATCCGCCATTTTCTCAgcatcacgtgacctacccacaTCAGTTGGGTAAAGTCCAgaaacagctgaagtcagaattattagcccccctgaattgttaTTAGCCTCActgtttattatataatataataatttctgTTTATTCATAATAAACATAATGTTCATAATAAACCTAATGTTTATTATATAATAGcctcactgtttattttttcccaaatttctgtttaacggagagaagatttcttctgcacatttctaaacataatagttttaataactcatttttaataaccgatttattttatctttacataATTACAC
>TCONS_00059942
GGTAGGATTCGTGGCTCCGCCTTCTTTCTCTAAAGTTTGAACTCATCTACAACCCGACAGGACACAAACAGACGTGTATTTGACTTTTGGATCTGCATTTACAAACATATGGAGTAATTTTACCTCTGTACAGGTGCAGTGTGTTGCTATGGCTGCGGTGGTGAAGGCGACCACCAGGGAAATGGCGCTCATTAACCCAGATGATGATTCATCTCCATCCTCTGCGCTCCCAGAAGACTCCCCGAAGCCATCGCTGGGCCCAAAACCACACCTCATGCCAAAACCATTCACCCTGCAAAGAAACCCTACCGTCCGCTCAATCCGAGCCCCAAAAACCAATTTCACAAAACACCTCCAGCGAGCCTCGTCTTCGGAAACACTTCTGGATTACACCAAGCCTAAAGAAATCACACCAAACGCAAACGGCACAGTAAACGGGTCCGCTTCTACACCCCAAAAAACAGACTTGATAGATAAACCAAAAAGCTCTGAGAGCAAAAATGCAGACGAAGATGTGCAAAAAGTTCAATTCAGAAGCAGAGCAAAATCATTGAGCTCTCAAAATGAgactttaaacaaacagaaaGCGCATGATGGCGAGTCTGAAACGGATGGCAAAGTGTCTCCACGATGCTGGCCGGCCCGAAATCGTCTCTCTGTCCATCTGACGTCCAAATTCGAGTCACCTGAGACTGCTATTAGAAATGATGCTCAAATCCACAAGGCGCCACTTTCTCCACCTGCAGTGTCAGAGTCCAAACCTGCGGTGGATAAAAAGGAAATGTTAGACGAAGAGATGAGCGGAGGCAGCATTAAACGAAGGATCAGCCTCCTGTTTGACCGATCTGCAGCGTCTCAGCGCCGGGACGCTGTCAACAGAAGAGACGTCACTCCTGCTGAAATAACTGTTGACATTAAACAGAGAATCCAGAATCTGAGCTTGGACTCGCCGAGGACGCGCTCGCCATCCACTGGAGCTCCTAAAAGTCCAACATCTGAGAAGAACCAGAGCTCCTCAGATGAGCTGCTGAATGAGAGATCATCAGAAAAAGTGGAAACAGAGACAAGTATAAAACCATCAAGAACAACAGAAAATAACACTGCTACATTTGTGGAAAATAGAGAAGAAAATGATGAtgattgtgatgatgatgatgatgatggagaagAAGATATGGAGAACTCTGTCATTATGCCTGTTTACAGACGAGTTGGATTAAGCTTCGATGCAGAGAAGAAACgaaaggaagaagaagaagaaaaacaaaaaaaggatgAGCAGTTAGAGAAGGAAAGAAAGCAACGAAAAGGAGAGGAAGAGAAAAAGCAAGAAGTGGAAAGACAAAGGCAGATAGAAGAAACAAGAAAGCAAGAGGAAGAACTAAAGAGAAAAATGGAAGAAGAAAGAAGACAGGCTGAAAAAGAAatagagagacagaaagaggagGAAAGAGCGAGAATGGAGAAACAACAGAAGGAAAGAGAACTGGAAGAAAAGAGACGAAAAATTCAGGAGATGGAAAGACAGAGAAAAGAAGAAAGACAGAGACAGGAACGAGAAAAAGAAGAGAGGttgaagaaagagagagaaattgaGGAGAGGAAACGAATTGAGGAGGAAAGACTGCGACAAGAGGAGCGATTGAGACAGGAACGAGAAAAAGAGAGGGTAAAGAAAGAAAAGGAGATGGAAGAAGAGAGACAACGGGTCCAAGAGCTGGAGAGACAGAAAGAGGAGGAAAGACGgaggaaagaagaagaagaaatggaGAGAATtaggaaagaaaaagaaattgaagAAGAAAGACGAAGAATTCAAGAGTTGGAGAGACAAATGGAAGAGGAAAGATTGAGAAAAGAACAAGAAATGGAGAGAAtaaggaaagaaaaagaaatggaaGAAGAAAGACGAAGAATTCAAGAGTTGGAGAGACACATGGAAGAGGAAAGATTGAGGAAAGAACAAGAAATGGAGAGAATAAGGAAAGAAAaggaaatggaggaagaaagaagaagaattcAAGAGTTAGAGAGACAGAAAGAAGAAGACAGATTGAGAAAAGAGAGGGAAATTGcgagattaaaaaaagaaaaagaaatggaaGAAGAAAGACGAAGGATTCAAGAACTGGAGAGACAGAAAGAGGAAGAAAGACTGAGAAAGGAGCAAGAAATAGagagaataaagaaagaaaaagaaattgaagaaaaaagaCAAAGAATTCAGGAATTAGAAAGACAGAAAGAGGAAGAAAGACtgagaaaagaaagagaaatggaGAGAAtaaggaaagaaaaagaaattgaggAAGAAAGACTGAGAATTCAAGAGTTGGAGAGACAGAAAGAGGAAGAAAGACTGAGAAAGGAGCAAGAAATGGagagaataaagaaagaaaaagaaatggaaGAAGAAAGACGAAGGATTCAGAAAttagaaagacagaaagaagagGAAAGATTaaggaaagaaagagaaatgGAAGAAGAAAGACAAAGAATTCAGCAGTTGGAGAGACAGAAAGAGGAGGAGAGAATAAGAAAGGAAAAAGAATTGGAAGAAGAGAGGAGGCGAATTCAAGAGTTTGAGAGACAAAGGGAAGAGGAAAgactaaaaaaagaaagagaaatggaGAGAATGAGGAAAGAAAAGGAAGAAGAAATGGAGAGATTGAAGAAAGAAAGAGATTTGGAAGAAGAGAGGAGAAAAATTCAAGAGTTGGAAAGACAGAAAGAGGAAGAAAGGCtgagaaaagaaagagaaattgAAAGAAtaaggaaagaaaaagaaatggaaGAAGAAAGGAGGAGGATTCAAGATttagaaagacagaaagaagaagaaagattaagaaaagagagagaaatgaaaGAAGAAAGACAGAGGAAAGAAAGAGAAATGGAAGAAGAAAGACGAAGGATTCAGGAATTAGAAAGACAGAAGGAAGAAGAACGACTGAGGAAAGAAAGAGAAATAGAAAGAGTaaggaaagagaaagaaatgGAAGAAGAAAGGAGGAGGATTCAGGAAAAAGAAAGACtaagaaaagaaagagaaatggaAGAAGAAAGACGAAGGAATCAGGAATTAGAAAGACAGAAGGAAGAGGAAAAATTGAGAAAAGAAAGAGAACTGGAGAGATTAAGgaaagaaatggaggaagaaagacgAAGAATCGAGGAGATTGAAAGACAAAAAGAAAGACTGAGACATGAAGGAGAAAAAATGATGGCGATGGAAATGTGTAAATCAGCAGAGCGGCCGCAAGAAGTTCCTACGAGTTTTGATTTAATATCGTTTGACGTTGAAGAACCGTCGCCGCCTGTCTCCTCCGATTCCATGGATGTCGAAGTAATTTACGATGATTTTTCGGTAAAACCACAAAGATGGGGAACCAGAGTGAGAGATTCTCCAACAACATCTCCAACCAGAGAAACCGCTGACCTCAGTCTACAGCCACAATTAAAATACAGTACACCGGGACTCCAAGAACCAGCCGGAGATCGGGTACATGTAGAAAACCTAATCGGATTTGAGCCTGAAGCATCCAGTCCACAGAACACGTCCTATATACATACAGAAAACAGACATCCGTCTTCATCTGAGGAGGAAACTGAGTGTACGCCAGAAGATCTGCTGGAGCCAGAAACTGAATTAAATGAGGATCAGTTGAAGGACTGTGAACCAGAAGAAGATCAGGACACAGAGAATCTAATCGAGGAAACAGAGGAACAAAGTGAAAACAGTGACACTGTTGACAGTCAGGGCACAGCGAGACTCAATCAAGCCCTTCAGAGACTGAATCAAGCCAGACGGCGAAAAACATCCAGTGATTCAGAAAACACAAATACCCCAATTCAGGAGGAGCCCGAACCACTGCCTCTTCTTGAGTCCTCAGCTCCTCCATTGGACTCCAGCGTTTTACGTTCCAAGGTCGATCTGGGAAAGAAGCGAAGTATAAAGCGCTCCAGACCGTCCCGTGCCGTCCGACAGAGAGCCGCTCTGCCTGCTCTGACTGAGGGAACAAACCCCGACTGGAGGTTCTGCGACTCCACAGATGCGAAAGTTCAGATTTCTAATGGAGGGGACTCAGAATCGGAAGAGGAACCATCCCAGGACGTCACGTCTTCTCCGGCCCCCAGTCAGCCCAAAAGAGTGTCTGTGTTTCCCGGGATGAACCCTTCAGCCTTGATGGCTCAGTTGAAGCGCAGGAGTGCCGCTCTAGATTCAGATGCTCAAGCAGAAGCTGCTACCCCTCCGTCTGTTCCCTCTCGCTCTCCCCGAACACCCAGCAAGACCCTCGGCCCCCGAGTGCTGCCCCCTGCTGACGCAAAGGATGCTAGG

Function

symbol description
tnks1bp1 Is expressed in neuromast mantle cell; neuromast support cell; and olfactory epithelium.

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-317 Is expressed in neuromast mantle cell; neuromast support cell; and olfactory epithelium.

Ensembl:

ensembl_id ENSDARG00000068760

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059941 False 4681 mRNA 0.42 7 6515741 6561376
TCONS_00059942 True 4345 mRNA 0.43 8 6516210 6567464

Neighbor

gene id symbol gene type direction distance location
XLOC_030806 NA coding downstream 3902 6511314 ~ 6511839 (-)
XLOC_030805 crybb3 coding downstream 7491 6489260 ~ 6508250 (-)
XLOC_030804 NA coding downstream 42987 6471025 ~ 6472754 (-)
XLOC_030803 CABZ01037298.1 coding downstream 82164 6401427 ~ 6433577 (-)
XLOC_030802 zgc:73226 coding downstream 137876 6350328 ~ 6377865 (-)
XLOC_030809 ostf1 coding upstream 158691 6726155 ~ 6745511 (-)
XLOC_030810 CABZ01041961.1 coding upstream 361570 6929034 ~ 6929148 (-)
XLOC_030811 CABZ01087503.1 coding upstream 580827 7148291 ~ 7148407 (-)
XLOC_030812 CABZ01087502.1 coding upstream 631293 7198757 ~ 7199998 (-)
XLOC_030813 NA coding upstream 809518 7376982 ~ 7377405 (-)
XLOC_030801 NA non-coding downstream 203223 6311493 ~ 6312518 (-)
XLOC_030800 NA non-coding downstream 317416 6198080 ~ 6198325 (-)
XLOC_030799 NA non-coding downstream 465016 6042066 ~ 6050725 (-)
XLOC_030814 CU856253.1 non-coding upstream 863961 7431425 ~ 7431523 (-)
XLOC_030816 CABZ01069879.1 non-coding upstream 1065231 7632695 ~ 7632819 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000337_01179622_01203684 NA coding CI01000337 null 1179622 ~ 1203961 (+)