XLOC_030820 (EGFLAM)


Basic Information

Item Value
gene id XLOC_030820
gene name EGFLAM
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 7919878 ~ 7969760 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059962
tctgtgcattaccccggactgtttctgactctgtgttgccttctgcctgccctcgacccacgcttGTTGAGTCCACCGCTGGACATCCAGCTGGAGACAGTGAACTGCACAGCGTTCAGTGTCCGGTGGAAAATGCCCCGCAGACACGTCAGCACCATCACTGGCTACAAGgatgTTGTAATTGGGAATCTGAAGGTGGCCACGCAGTACCGGGTCAGTGTAGGAGCGTATGGCTGGGCAGGAGAGGGCAGACCCAGCATGCCCCGGGACATCAGCACTGAAAAGTGCATGCCTCCTGCTCCTCCAACACAGCCCAATGTGGTGGCAGTGTCCGACACTGAGCTGGCGATGTCATGGCAACATGGAGAGAGTGATGGAAGCGCACCTGTGCTCTACTTCCTGGTGGCCTATATCAGGCCGGAGATGGACACTGAGTGGACGTACATCAGAGAGCCTGTGGAGTCCAACTCTATGGTGCTCAAGGGTCTGATTCCTGAGACAGAGTACCAGTTTGTGATCCGAGCCGTAAATGCACACGGCATCAGCCCTCCCAGTTCAGTGGACACAGGCAGTGGAGACTATGACGTCTACATCTCAAACTCTGATAATAAAGATGAAGACAAGCTTGATATCGATGACTCTGACTATGATTTCTTCATTGAGGAggtgagagatttttttttattGACAACAGCCACACCCATTGTACGGACTGCCACGCCTCCTCCCGCAGTGCCATCTTCCAGTCCATCAATGACACCATGGAAAGGGGAAAGAGCTCGAGTCTATGATGTGCCATGTGAAGAGACGGTCTGCCCTGCTGACAGCTTCTGCATCAATGATTACGACACTGGCGGCTCTCGATGTCACTGCAACCTCGGCCGACAGGGAGACTTCTGCTCAGAAGGTCTGACGATAAATTTCCCAAAGTTTTACGGCTACTCTCACATGACGTTCGAGCCTCTTAAAAACTCGTATCAGAGCTTCCAGATCAGCCTGGAGTTTAAGGCAGAGGCTGAGGACGGACTGCTTTTGTATTGTGGAGAGAATGAACACGGTAGAGGAGATTTCACCTCCCTCGCTCTCATACGGGGAAAACTACACTACAGGTTTAACTGTGGGACAGGAGCAGCACAGATCATCAGCGACAGCTCTATTGTGATTGGACAGTGGCACACCGTCACCATATTTAGAGACGGCATGAATGGCTGGCTGCGATTGGACAATGACACACCGGTGTCAAGCCGTTCACAGGGTCAGTACACCAAAATAACCTTCCGGACAGCTTTGTTTTTGGGTGGAGCTCCAAATGGCTACTGGTTAGTGAGAGCTGTGGGCACCAACCGCGGCTTTCAGGGCTGCATGCAGAGTCTGACTGTCAACAGTAAAGCCATAGACATCCGACCCTGGCCTAAAGGAAATGCACTGAGTGGAGCAGACATCGgcgAGTGCAGTAACAGTGTGTGTGAGAAGGTCACCTGTGCCAACGGAGGGATCTGCTTTGCCAACCGCGCGGACGGCTTTATCTGCCTCTGCCCTCTGGGTTATAAGGGCTTCCTCTGTGAGGAGAGTTTCCTCTTGTCTCTGCCCCAGTTTAACCAGAGCATGTTCTCGTACGCCAGCGCCCCCTGGCCTCAATCGTCCCACAACTACCTTTCCTTCATGGAATTTGAGGTGACCTTCCAGCCAACCAGTCCTGACGGCACGCTGCTCTACACTGATGATGCCACCAGTCGGGACTTTCTGTCCATCAGCCTAGTGGCCGGATATGTGGAGTTTCGCTTCGACTGTGGCTCCGGTGCAACAGTCATCAGGAGTGAAGAAGCCATTGCTATGAATGTGTGGCATGAGTTACGTGTGTCTCGCACCGCAAAAAACGGCATCCTGCAAGTAGACAACCAGAGGCCAGTGGAGGGCATGGCAGAAGGTGCATTTACACAGATAAAGTGTAGTTCTCCTCTTTATATCGGAGGAGTTCCTAATTATGACATTACTAAGCCCAGCGCTGGCATCCTGAGACCCTACAGTGGATCTGTTCAGAAGATCACTCTAAATGATCGCGGTATAGAGCTGAATCCAGGCCAGGCGTTTGGTGTGAACGTGCTGAACGCGGCTCATCCGTGTGTGGACAACCCGTGTGCGAATGGAGGAACATGCAGGGCCAAGTGGGACGAATACGACTGCGACTGTGCTCTTGGGTATGATGGAAAACACTGTCAGAAGGCGGTAACTGAATCCATTGAGATCCCTCAGTTCACCGGACGCAGCTATCTGACATATGACAACAGAGATATCCTCAAGAGGATTTCGGGTTCCAGAACAAACTTGTTTATGCGTTTTAAAAGCACGTCCAAAGATGGACTTTTATTATGGCGTGGAGAGAGTCCGATGAGAGCCAACAGTGATTACCTGTCTTTGGGTCTTCAAGACGGATCGCTTATTTTCAGTTATAATCTGGGTAGTGGAGCTGCTACTGTGGTCATCAATGGTACATTCAGTGATGGCAAATGGCACAGAGTGAAGGCTGTGAGGGATGGACAGTCTGGTAAACTCACTGTCGATGACTATGGAGCTCAAACCGGCCGTTCTCCTGGTAAAATGAGACAGCTGAACATCAACGGTGACCTATACATTGGTGGGATGAAGGAGATCGCGCTCCACACTAACAGGCAGTACATGCGAGGTTTGGTGGGATGCATTTCTCATTTCACTTTGGCCACAGACTACCACCTGTCTCTAGTGGACGATGCAGTCGACGGCAAGAACATCAACACCTGCACCAACTGA
>TCONS_00059963
tcttctgtgcattaccccggactgtttctgactctgtgttgccttctgcctgccctcgacccacgcttGTTGAGTCCACCGCTGGACATCCAGCTGGAGACAGTGAACTGCACAGCGTTCAGTGTCCGGTGGAAAATGCCCCGCAGACACGTCAGCACCATCACTGGCTACAAGGTGTTTTACACAGAGATGAGGAATAATCGACCAACCAGCAATGCTGTTGTCCTGGAAgatgTTGTAATTGGGAATCTGAAGGTGGCCACGCAGTACCGGGTCAGTGTAGGAGCGTATGGCTGGGCAGGAGAGGGCAGACCCAGCATGCCCCGGGACATCAGCACTGGCTCTCATGAAAAGTGCATGCCTCCTGCTCCTCCAACACAGCCCAATGTGGTGGCAGTGTCCGACACTGAGCTGGCGATGTCATGGCAACATGGAGAGAGTGATGGAAGCGCACCTGTGCTCTACTTCCTGGTGGCCTATATCAGGCCGGAGATGGACACTGAGTGGACGTACATCAGAGAGCCTGTGGAGTCCAACTCTATGGTGCTCAAGGGTCTGATTCCTGAGACAGAGTACCAGTTTGTGATCCGAGCCGTAAATGCACACGGCATCAGCCCTCCCAGTGCCATAAACAACCCCGTTCGCACTCTCGGTTCAGTGGACACAGGCAGTGGAGACTATGACGTCTACATCTCAAACTCTGATAATAAAGATGAAGACAAGCTTGATATCGATGACTCTGACTATGATTTCTTCATTGAGGAggtgagagatttttttttattCTTCACTCCGACAACAGCATCGATAtggaccacaacaacaacaactacaactgtAACCATGACAACCACGTCCAGGACAACAGCCACACCCATTGTACGGACTGCCACGCCTCCTCCCGCAGTGCCATCTTCCAGTCCATCAATGACACCATGGAAAGGGGAAAGAGCTCGAGTCTATGATGTGCCATGTGAAGAGACGGTCTGCCCTGCTGACAGCTTCTGCATCAATGATTACGACACTGGCGGCTCTCGATGTCACTGCAACCTCGGCCGACAGGGAGACTTCTGCTCAGAAGGTCTGACGATAAATTTCCCAAAGTTTTACGGCTACTCTCACATGACGTTCGAGCCTCTTAAAAACTCGTATCAGAGCTTCCAGATCAGCCTGGAGTTTAAGGCAGAGGCTGAGGACGGACTGCTTTTGTATTGTGGAGAGAATGAACACGGTAGAGGAGATTTCACCTCCCTCGCTCTCATACGGGGAAAACTACACTACAGGTTTAACTGTGGGACAGGAGCAGCACAGATCATCAGCGACAGCTCTATTGTGATTGGACAGTGGCACACCGTCACCATATTTAGAGACGGCATGAATGGCTGGCTGCGATTGGACAATGACACACCGGTGTCAAGCCGTTCACAGGGTCAGTACACCAAAATAACCTTCCGGACAGCTTTGTTTTTGGGTGGAGCTCCAAATGGCTACTGGTTAGTGAGAGCTGTGGGCACCAACCGCGGCTTTCAGGGCTGCATGCAGAGTCTGACTGTCAACAGTAAAGCCATAGACATCCGACCCTGGCCTAAAGGAAATGCACTGAGTGGAGCAGACATCGgcgAGTGCAGTAACAGTGTGTGTGAGAAGGTCACCTGTGCCAACGGAGGGATCTGCTTTGCCAACCGCGCGGACGGCTTTATCTGCCTCTGCCCTCTGGGTTATAAGGGCTTCCTCTGTGAGGAGAGTTTCCTCTTGTCTCTGCCCCAGTTTAACCAGAGCATGTTCTCGTACGCCAGCGCCCCCTGGCCTCAATCGTCCCACAACTACCTTTCCTTCATGGAATTTGAGGTGACCTTCCAGCCAACCAGTCCTGACGGCACGCTGCTCTACACTGATGATGCCACCAGTCGGGACTTTCTGTCCATCAGCCTAGTGGCCGGATATGTGGAGTTTCGCTTCGACTGTGGCTCCGGTGCAACAGTCATCAGGAGTGAAGAAGCCATTGCTATGAATGTGTGGCATGAGTTACGTGTGTCTCGCACCGCAAAAAACGGCATCCTGCAAGTAGACAACCAGAGGCCAGTGGAGGGCATGGCAGAAGGTGCATTTACACAGATAAAGTGTAGTTCTCCTCTTTATATCGGAGGAGTTCCTAATTATGACATTACTAAGCCCAGCGCTGGCATCCTGAGACCCTACAGTGGATCTGTTCAGAAGATCACTCTAAATGATCGCGGTATAGAGCTGAATCCAGGCCAGGCGTTTGGTGTGAACGTGCTGAACGCGGCTCATCCGTGTGTGGACAACCCGTGTGCGAATGGAGGAACATGCAGGGCCAAGTGGGACGAATACGACTGCGACTGTGCTCTTGGGTATGATGGAAAACACTGTCAGAAGGCGGTAACTGAATCCATTGAGATCCCTCAGTTCACCGGACGCAGCTATCTGACATATGACAACAGAGATATCCTCAAGAGGATTTCGGGTTCCAGAACAAACTTGTTTATGCGTTTTAAAAGCACGTCCAAAGATGGACTTTTATTATGGCGTGGAGAGAGTCCGATGAGAGCCAACAGTGATTACCTGTCTTTGGGTCTTCAAGACGGATCGCTTATTTTCAGTTATAATCTGGGTAGTGGAGCTGCTACTGTGGTCATCAATGGTACATTCAGTGATGGCAAATGGCACAGAGTGAAGGCTGTGAGGGATGGACAGTCTGGTAAACTCACTGTCGATGACTATGGAGCTCAAACCGGCCGTTCTCCTGGTAAAATGAGACAGCTGAACATCAACGGTGACCTATACATTGGTGGGATGAAGGAGATCGCGCTCCACACTAACAGGCAGTACATGCGAGGTTTGGTGGGATGCATTTCTCATTTCACTTTGGCCACAGACTACCACCTGTCTCTAGTGGACGATGCAGTCGACGGCAAGAACATCAACACCTGCACCAACTGA

Function

symbol description
egflam Predicted to enable calcium ion binding activity and glycosaminoglycan binding activity. Predicted to be involved in animal organ morphogenesis and tissue development. Predicted to act upstream of or within extracellular matrix organization; peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan; and positive regulation of cell-substrate adhesion. Part of cell surface.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099008

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059962 False 2787 mRNA 0.52 21 7919878 7969757
TCONS_00059963 True 2961 mRNA 0.51 22 7919878 7969760

Neighbor

gene id symbol gene type direction distance location
XLOC_030819 opn4xb coding downstream 22458 7853463 ~ 7897420 (-)
XLOC_030817 pdlim5a coding downstream 75613 7722017 ~ 7844265 (-)
XLOC_030818 NA coding downstream 194603 7725064 ~ 7725275 (-)
XLOC_030815 bmpr1ba coding downstream 207654 7488064 ~ 7712224 (-)
XLOC_030816 CABZ01069879.1 coding downstream 287059 7632695 ~ 7632819 (-)
XLOC_030821 FP016143.1 coding upstream 2999 7972759 ~ 7972879 (-)
XLOC_030822 nipbla coding upstream 36151 8005911 ~ 8096232 (-)
XLOC_030823 slc1a3a coding upstream 141590 8111350 ~ 8171625 (-)
XLOC_030824 NA coding upstream 347958 8317718 ~ 8325015 (-)
XLOC_030825 spef2 coding upstream 385887 8355647 ~ 8406192 (-)
XLOC_030814 CU856253.1 non-coding downstream 488355 7431425 ~ 7431523 (-)
XLOC_030813 NA non-coding downstream 542473 7376982 ~ 7377405 (-)
XLOC_030811 CABZ01087503.1 non-coding downstream 771471 7148291 ~ 7148407 (-)
XLOC_030826 NA non-coding upstream 439701 8409461 ~ 8416833 (-)
XLOC_030830 BX897662.1 non-coding upstream 665508 8635268 ~ 8635392 (-)
XLOC_030831 BX897662.3 non-coding upstream 668044 8637804 ~ 8640000 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000337_01547989_01568642 EGFLAM coding CI01000337 null 1547989 ~ 1568642 (+)