G1184665


Basic Information

Item Value
gene id G1184665
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50090451 ~ 50138282 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351041
GTCTAATCTTCTGCGTAGGTCATCGATTtaattctccaaagattgcacgtttgctagcagaatgtagggaagtgggggtttattagatcgcctaccaattctcagaaggcagcccgcccttcGGACCCTTTTTCTCCTCTACCTCTTCACGtaaatcacagggatctgggcctgttcccgaggaagcagtatatcctttgagTCAGGCTCGTCAGACTGGTGAAcgaaaaaaaaggattctgcttgtccgtggtgagtaatcgcagccctgatgtctagaagttattttcggttaTAAGAGACTGATTCAAACACACATCAACATACAATAAACCAAATATACAGCTGTCCTTTTACACCTGTCCCCGATCAATGAAAAAATGGTGCAATAGGCCTACTATAGTCAATCTTATTGCTGTGATTCATTTGTCATATTTACACATTTCTCTCCCACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351041 True 455 lncRNA 0.43 2 50090451 50138282

Neighbor

gene id symbol gene type direction distance location
si:ch211-214j24.15 LOC106606868 coding downstream 23053 50059034 ~ 50067398 (-)
LOC110486699 LOC106601618 coding downstream 50118 49970722 ~ 50040333 (-)
LOC110486698 LOC106601594 coding downstream 236780 49831067 ~ 49853671 (-)
LOC118938314 NA coding downstream 548702 49537199 ~ 49544276 (-)
LOC110486692 LOC106606873 coding downstream 556861 49530771 ~ 49533590 (-)
LOC110486713 NA coding upstream 492723 50631005 ~ 50633690 (-)
LOC110486716 LOC106601616 coding upstream 509152 50647434 ~ 50653284 (-)
LOC110486719 LOC105013088 coding upstream 551900 50690182 ~ 50697090 (-)
LOC118938085 NA coding upstream 581530 50719812 ~ 50730095 (-)
LOC110485208 LOC106606837 coding upstream 593815 50732097 ~ 50824433 (-)
G1184668 LOC100136769 non-coding downstream 5735 50079143 ~ 50084716 (-)
G1184661 NA non-coding downstream 25263 50048786 ~ 50065188 (-)
G1184673 NA non-coding downstream 34215 50053593 ~ 50056236 (-)
G1184656 NA non-coding downstream 47333 50042788 ~ 50043118 (-)
G1184640 NA non-coding downstream 75768 50014251 ~ 50014683 (-)
G1184782 NA non-coding upstream 166555 50304837 ~ 50305278 (-)
G1184896 NA non-coding upstream 356692 50494974 ~ 50495465 (-)
G1184958 NA non-coding upstream 464562 50602844 ~ 50603081 (-)
G1184963 NA non-coding upstream 469338 50607620 ~ 50607896 (-)
G1184964 NA non-coding upstream 469687 50607969 ~ 50608323 (-)
G1183706 NA other downstream 401995 49685338 ~ 49688456 (-)
LOC110486687 LOC106601611 other downstream 586441 49486817 ~ 49504819 (-)
setd1a LOC106585476 other downstream 733237 49346540 ~ 49361234 (-)
G1184986 NA other upstream 488365 50626647 ~ 50628539 (-)
G1185046 NA other upstream 641983 50780265 ~ 50781858 (-)
G1186080 NA other upstream 1183518 51321800 ~ 51323931 (-)
G1186075 NA other upstream 1214027 51352309 ~ 51373954 (-)

Expression


Co-expression Network