XLOC_030831 (BX897662.3)



Basic Information


Item Value
gene id XLOC_030831
gene name BX897662.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 8637804 ~ 8640000 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00059977
gttttaattatgaaaaagttaataatgactttaaaaagcTGTGTTTCTTCTGTTGTGGACAGGGATCAGGAGGACTTTTATGATGACGCAGGCGTCATGGACCAAACACAAGCATCACTAGTGTCCAATACCAAAAACTCAGCACAAGCATTTTCCTTCCTCCCCCCACCTCCACCTGGTCATCCGACAATCACATCTGTGACTCCGCCCCCTCCGGCAGACTTCTCATttctccctcctcctcctccaacGGATCAGGAAGACTTGTATGATGACACAGGTGTCATGGACCAAACACAAGGTCTGTTATTTACCTTAGTTTCTAATAaatgttaaaggaatagttcacccaaaatgaa
>TCONS_00061515
ATGTCACAGTAAAAGTGTacaattcagtgttttttttctcatgTTCTGTTTCTGTCAGTGTCCAATACCAAAAACTCAGCACAAGCATTTTCCTTCCTCCCCCCACCTCCACCTGGTCATCCGACAATCACATCTGTGACTCCGCCCCCTCCGGCAGACTTCTCATttctccctcctcctcctccaacGGATCAGGAAGACTTGTATGATGACACAGGTGTCATGGACCAAACACAAGGT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117779

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00059977 False 359 lncRNA 0.43 3 8637804 8640000
TCONS_00061515 True 240 lncRNA 0.48 2 8637860 8639434

Neighbor


gene id symbol gene type direction distance location
XLOC_030829 fyba coding downstream 1636 8616667 ~ 8636168 (-)
XLOC_030830 BX897662.1 coding downstream 2412 8635268 ~ 8635392 (-)
XLOC_030828 rictora coding downstream 23587 8533929 ~ 8614217 (-)
XLOC_030827 lifra coding downstream 154267 8417184 ~ 8483537 (-)
XLOC_030826 NA coding downstream 220971 8409461 ~ 8416833 (-)
XLOC_030832 NA coding upstream 678 8640678 ~ 8644183 (-)
XLOC_030833 zgc:153352 coding upstream 21414 8661414 ~ 8682590 (-)
XLOC_030834 paip1 coding upstream 44652 8684652 ~ 8711157 (-)
XLOC_030835 mybbp1a coding upstream 72798 8712798 ~ 8765428 (-)
XLOC_030836 BX897662.2 coding upstream 82928 8722928 ~ 8723043 (-)
XLOC_030824 NA non-coding downstream 312789 8317718 ~ 8325015 (-)
XLOC_030821 FP016143.1 non-coding downstream 664925 7972759 ~ 7972879 (-)
XLOC_030818 NA non-coding downstream 912529 7725064 ~ 7725275 (-)
XLOC_030839 AL928901.1 non-coding upstream 319728 8959728 ~ 8963775 (-)
XLOC_030840 NA non-coding upstream 390240 9030240 ~ 9031751 (-)
XLOC_030843 NA non-coding upstream 467085 9107085 ~ 9127559 (-)

Expression



Co-expression Network