XLOC_030832


Basic Information

Item Value
gene id XLOC_030832
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 8640678 ~ 8644183 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061516
CAGAATTCAGAGCTGATCCAGAAAATGTCCAAACTCAAACCTGTGGACATGAATAAACCCCCAGGCACCAGGCCTTCTCCAAAACCCCTAATAGTCAAACCCAACTTCACAGTCAACTCTCTAGAGAGCAGATTAAAAGCCACTGATGCCGCAGGATTGAAACTACCCAATAAAGCACAACAGGAATACTCTTTTTTAAAATCCCCCAACGCTGGAGCCACGCCGCCTGTCATGCACAAAATCAATCTCCAGAAAGACAGTCCTGCAGCTAAAGAAAGCACATCGGCTGATTTATCAGAGCCAAAAAAGAAAACTCTTCCCAGCTTGTTTGCTTTAGGAAAATGTCCTGCTAAACCAGCCAGACCTTCTCTTGTTGACCTCAGCAAATTCGGAAGAAACGTGTCAAATACCAACAACCCAGCTTTTTCCGTCCTCCCCCCACCTCCGATTGGTCATCCGTCCATCACATCGGTGACTCCGCCCCCTCCAGCTGACTTCTCATTTCTCCCTCCTCCTCCAATGTGAGTCTGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061516 True 531 lncRNA 0.47 2 8640678 8644183

Neighbor

gene id symbol gene type direction distance location
XLOC_030831 BX897662.3 coding downstream 678 8637804 ~ 8640000 (-)
XLOC_030829 fyba coding downstream 4510 8616667 ~ 8636168 (-)
XLOC_030830 BX897662.1 coding downstream 5286 8635268 ~ 8635392 (-)
XLOC_030828 rictora coding downstream 26461 8533929 ~ 8614217 (-)
XLOC_030827 lifra coding downstream 157141 8417184 ~ 8483537 (-)
XLOC_030833 zgc:153352 coding upstream 17231 8661414 ~ 8682590 (-)
XLOC_030834 paip1 coding upstream 40469 8684652 ~ 8711157 (-)
XLOC_030835 mybbp1a coding upstream 68615 8712798 ~ 8765428 (-)
XLOC_030836 BX897662.2 coding upstream 78745 8722928 ~ 8723043 (-)
XLOC_030837 fgf10b coding upstream 124886 8769069 ~ 8817841 (-)
XLOC_030826 NA non-coding downstream 223845 8409461 ~ 8416833 (-)
XLOC_030824 NA non-coding downstream 315663 8317718 ~ 8325015 (-)
XLOC_030821 FP016143.1 non-coding downstream 667799 7972759 ~ 7972879 (-)
XLOC_030839 AL928901.1 non-coding upstream 315545 8959728 ~ 8963775 (-)
XLOC_030840 NA non-coding upstream 386057 9030240 ~ 9031751 (-)
XLOC_030843 NA non-coding upstream 462902 9107085 ~ 9127559 (-)
XLOC_030844 NA non-coding upstream 500184 9144367 ~ 9146777 (-)

Expression


Co-expression Network